| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1930420 = | 22 (0.420) | 9 (0.210) | 7/204 | NT | 38.9% | intergenic (‑45/+60) | PP_1729/apeB | hypothetical protein/M18 family aminopeptidase |
| ? | NC_002947 | 1930478 = | 10 (0.230) | intergenic (‑103/+2) | PP_1729/apeB | hypothetical protein/M18 family aminopeptidase | |||||
ACAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCG > NC_002947/1930342‑1930624 | aCAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCaa > 2:746354/1‑142 (MQ=255)aCAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCaa < 1:746354/142‑1 (MQ=255) aGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGAACTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAAc > 2:162576/1‑150 (MQ=255) tAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTAAGTACCTTCACCAgg > 1:787813/1‑150 (MQ=255) cTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTgcgc > 2:481458/1‑150 (MQ=255) ccTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGGGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAAGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCAACAGGTGCGCCAGGTCATGGCTGGCGCACGGcg > 2:371594/1‑149 (MQ=255) gTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGa < 1:481458/150‑1 (MQ=255) GCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGt > 1:162576‑M1/1‑150 (MQ=255) ctgttcgcggcggttcgacgcctcgaacaggccgcgcctgcttaCATCAAGGCAGCt > 1:1249169‑M2/45‑57 (MQ=255) ctgttcgcggcggttcgacgcctcgaacaggccgcgcctgcttaCATCAAGGCAGCt < 2:1249169‑M2/13‑1 (MQ=255) ctgttcgcggcggttcgacgcctcgaacaggccgcgcctgcttaCATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCg > 1:1354909‑M2/45‑150 (MQ=255) ctgttcgcggcggttcgacgcctcgaacaggccgcgcctgcttaCATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCg > 2:153662‑M2/45‑150 (MQ=255) tgttcgcggcggttcgacgcctcgaacaggccgcgcctgcttaCATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTc < 2:194355‑M2/80‑1 (MQ=255) tgttcgcggcagttcgacgcctcgaacaggccgcgcctgcttaCATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTc > 1:194355‑M2/44‑123 (MQ=255) TGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCgg < 2:746007‑M1/150‑1 (MQ=255) TGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCgg < 1:137662‑M1/150‑1 (MQ=255) ttcgcggcggttcgacgcctcgaacaggccgcgcctgcttaCATCAAGGCAGCTCGCGGCTACGGTAGaa < 2:937635‑M2/29‑1 (MQ=255) ttcgcggcggttcgacgcctcgaacaggccgcgcctgcttaCATCAAGGCAGCTCGCGGCTACGGTAGaa > 1:937635‑M2/42‑70 (MQ=255) gcggcggttcgacgcctcgaacaggccgcgcctgcttaCATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTAGGCAAAc > 1:1021847‑M2/39‑150 (MQ=255) GAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGcc < 1:732696‑M1/95‑1 (MQ=255) GAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGcc > 2:732696‑M1/1‑95 (MQ=255) GAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAAc < 1:722265‑M1/150‑1 (MQ=255) GAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAAc < 1:261511‑M1/150‑1 (MQ=255) gTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTa > 1:591999/1‑59 (MQ=255) gTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTa < 2:591999/59‑1 (MQ=255) aCCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCAc > 2:986371/1‑150 (MQ=255) ttaCATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTa > 2:1130032‑M2/4‑43 (MQ=255) ttaCATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTa < 1:1130032‑M2/40‑1 (MQ=255) ttaCATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCg < 1:153662‑M2/147‑1 (MQ=255) ttaCATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTCCGCACACCCAGGTGGCTGGCg > 2:204723‑M2/4‑150 (MQ=255) | ACAGCAATCCTTTTGCAGTGGGGCCATGTAACAAGCATAGCGCTTGACCAACGAGGCGTGATTGACCTTGAGCACGTTTAAGCAGGCGCGGCCTGTTCGAGGCGTCGAACCGCCGCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCG > NC_002947/1930342‑1930624 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |