New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2314872	67 (1.270)	5 (0.100)	5/234	NT	7.2%	coding (296/888 nt)	PP_2036	4‑hydroxy‑tetrahydrodipicolinate synthase
	?	NC_002947	= 2314907	66 (1.320)					coding (261/888 nt)	PP_2036	4‑hydroxy‑tetrahydrodipicolinate synthase

TAGAGCATGATCGGAATGTCGATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCATCACCGCCGTAGCACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2314758‑2314872 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgcCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGGTGCTGCCCATCTCTTACTGGAAGCTCACCGAAGCCGAAGTGGTCGCCCACTACAAGGCGGTCGGCGCCGCCATCGACATTCCGATCATGCTCT  <  NC_002947/2314907‑2314759                                                                                                                                                                                                                                                                          TAGAGCATGATCGGAATGTCGATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCATCACCGCCGTA‑‑‑‑‑‑‑‑‑GCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTA                                                                                                           >  1:1070611/1‑150  AGAGCATGATCGGAATGTCGATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCATCACCGCCGTA‑‑‑‑‑‑‑‑‑GCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTAC                                                                                                          <  2:1070611/150‑1                      ATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCATCACCGCCGTAGCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGG                                                                                               <  2:839432/150‑1                                       CTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCATCACCGCCGTAGCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGT                                                                                                               <  1:460440/117‑1                                       CTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCATCACCGCCGTAGCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGT                                                                                                               >  2:460440/1‑117                                                                                                          tgccCACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGGTGCTGCCCATCTCTTACTGGAAGCTCACCGAAGCCGAAGTGGTCGCCCACTACAAGGCGGTCGGCGCCGCCATCGACATTCCGA           <  1:10415/146‑1                                                                                                              CACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGGTGCTGCCCATCTCTTACTGGAAGCTCACCGAAGCCGAAGTGGTCGCCCACTACAAGGCGGTCGGCGCCGCCATCGACATTCCGATCAT       >  1:1383844/1‑150                                                                                                              CACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGGTGCTGCCCATCTCTTACTGGAAGCTCACCGAAGCCGAAGTGGTCGCCCACTACAAGGCGGTCGGCGCCGCCATCGACATTCCGATCAT       >  1:219729/1‑150                                                                                                              CACCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGGTGCTGCCCATCTCTTACTGGAAGCTCACCGAAGCCGAAGTGGTCGCCCACTACAAGGCGGTCGGCGCCGCCATCGACATTCCGATCAT       >  2:363040/1‑150                                                                                                               cCCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGGTGCTGCCCATCTCTTACTGGAAGCTCACCGAAGCCGAAGTGGTCGCCCACTACAAGGCGGTCGGCGCCGCCATCGACATTCCGATCATG      <  2:859560/149‑1                                                                                                                CCGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGGTGCTGCCCATCTCTTACTGGAAGCTCACCGAAGCCGAAGTGGTCGCCCACTACAAGGCGGTCGGCGCCGCCATCGACATTCCGATCATGC     <  2:1383844/150‑1                                                                                                                 CGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGGTGCTGCCCATCTCTTACTGGAAGCTCACCGAAGCCGAAGCGGTCGCCCACTACAAGGCGGTCGGCGCCGCCATCGACATTC              <  1:175565/140‑1                                                                                                                 CGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGGTGCTGCCCATCTCTTACTGGAAGCTCACCGAAGCCGAAGCGGTCGCCCACTACAAGGCGGTCGGCGCCGCCATCGACATTC              >  2:175565/1‑140                                                                                                                 CGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGT                                                                                                    <  1:1222250/54‑1                                                                                                                 CGCCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGT                                                                                                    >  2:1222250/1‑54                                                                                                                   CCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGGTGCTGCCCATCTCTTACTGGAAGCTCACCGAAGCCGAAGTGGTCGCCCACTACAAGGCGGTCGGCGCCGCCATCGACATTCCGATCATGCTCT  <  1:562819/150‑1                                                                                                                   CCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGGTGCTGCCCATCTCTTACTGGAAGCTCACCGAAGCCGAAGTGGTCGCCCACTACAAGGCGGTCGGCGCCGCCATCGACATTCCGATCATGCTCT  >  1:1062236/1‑150                                                                                                                                                                                                                                                                          TAGAGCATGATCGGAATGTCGATGGCGGCGCCGACCGCCTTGTAGTGGGCGACCACTTCGGCTTCGGTGAGCTTCCAGTAAGAGATGGGCAGCACCATCACCGCCGTAGCACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2314758‑2314872 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgcCCGCACCGTGCAGCGTGCCCGCCTGGCACAGGCCTGCGGTGCTACGGCGGTGATGGTGCTGCCCATCTCTTACTGGAAGCTCACCGAAGCCGAAGTGGTCGCCCACTACAAGGCGGTCGGCGCCGCCATCGACATTCCGATCATGCTCT  <  NC_002947/2314907‑2314759

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.