| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2340035 = | 40 (0.760) | 3 (0.060) | 3/232 | NT | 7.1% | coding (634/1308 nt) | dctA‑II | C4‑dicarboxylate transport protein |
| ? | NC_002947 | 2340072 = | 41 (0.830) | coding (671/1308 nt) | dctA‑II | C4‑dicarboxylate transport protein | |||||
CCCAGCACCACGAGGAACTCTTCGCGGAAATAGCGCAGCAACTTCCACAGGCTGAAGCCATGGGCGCGGCAGATGCCACCGAGCACCACCAGCACGAAGAAGGCGCAGGCGATGTACAACGTCCCGACCAGCTTGGCCAGCGCGCCAAGGGACGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2340189‑2340035‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggacgtTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGCCTGTGGAAGTTGCTGCGCTATTTCCGCGAAGAGTTCCTCGTGGTGCTGGGTACTTCCTCCACCGAGCCGGTGCTGCCGC > NC_002947/2340072‑2340218 CCCAGCACCACGAGGAACTCTTCGCGGAAATAGCGCAGCAACTTCCACAGGCTGAAGCCATGGGCGCGGCAGATGCCACCGAGCACCACCAGCACGAAGAAGGCGCAGGCGATGTACAACGTCCCGACCAGCTTGGCCAGCGCGCCAAGG > 1:451915/1‑150 CCAGCACCACGAGGAACTCTTCGCGGAAATAGCGCAGCAACTTCCACAGGCTGAAGCCATGGGCGCGGCAGATGCCACCGAGCACCACCAGCACGAACAAGGCGCAGGCGATGTACAACGTCCCGACCAGATTGGCCAGCGCGACAAGac > 2:657476/1‑148 CAGCACCACGAGGAACTCTTCGCGGAAATAGCGCAGCAACTTCCACAGGCTGAAGCCATGGGCGCGGCAGATGCCACCGAGCACCACCAGCACGAAGAAGGCGCAGGCGATGTACAACGTCCCGACCAGCTTGGCCAGCGCGCCAAGGGA > 2:1375258/1‑150 AGCACCACGAGGAACTCTTCGCGGAAATAGCGCAGCAACTTCCACAGGCTGAAGCCATGGGCGCGGCAGATGCCACCGAGCACCACCAGCACGAAGAAGGCGCAGGCGATGTACAACGTCCCGACCAGCTTGGCCAGCGCGCCAAGGGAC < 1:1375258/150‑1 CAACGTCCCGACCAGCTTGGCCAGCGCGCCAAGGGAAGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGCCTGTGGAAGTTGCTGCGCTATTTCCGCGAAGAGTTCCTCGTGG > 2:578458/1‑150 TCCCGACCAGCTTGGCCAGCGCGCCAAGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATG > 1:160779/1‑94 TCCCGACCAGCTTGGCCAGCGCGCCAAGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATG < 2:160779/94‑1 GGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGCCTGTGGAAGTTGCTGCGCTATTTCCGCGAAGAGTTCCTCGTGGTGCTGGGTACTTCCTCCACCGAGCCGGTGCTG > 1:140118/1‑150 CGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGCCTGTGGAAGTTGCTGCGCTATTTCCGCGAAGAGTTCCTCGTGGTGCTGGGTACTTCCTCCACCGAGCCGGTGCTGCCGC < 1:543591/150‑1 TTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGCCTGTGGAAGTTGCTGCGCTATTTCCGCGAAGAGTTCCTCGTGGTGCTGGGTACTTCCTCCACCGAGC > 1:682525/1‑136 TTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGCCTGTGGAAGTTGCTGCGCTATTTCCGCGAAGAGTTCCTCGTGGTGCTGGGTACTTCCTCCACCGAGC < 2:682525/136‑1 CCCAGCACCACGAGGAACTCTTCGCGGAAATAGCGCAGCAACTTCCACAGGCTGAAGCCATGGGCGCGGCAGATGCCACCGAGCACCACCAGCACGAAGAAGGCGCAGGCGATGTACAACGTCCCGACCAGCTTGGCCAGCGCGCCAAGGGACGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2340189‑2340035‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggacgtTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGCCTGTGGAAGTTGCTGCGCTATTTCCGCGAAGAGTTCCTCGTGGTGCTGGGTACTTCCTCCACCGAGCCGGTGCTGCCGC > NC_002947/2340072‑2340218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |