New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2340035 =	40 (0.760)	3 (0.060)	3/232	NT	7.1%	coding (634/1308 nt)	dctA‑II	C4‑dicarboxylate transport protein
	?	NC_002947	2340072 =	41 (0.830)					coding (671/1308 nt)	dctA‑II	C4‑dicarboxylate transport protein

TCGTCGATGGGCGAAAAGGGCAAGCCGGTACTGGACGTGCTGGAGTCGGCCTCGACCATGGTGTTTCGCATCTTCGGCTACCTGATGCGCTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGCCTGTGGAAGTTGCTGCGCTATTTCCGCGAAGAGTTCCTCGTG  >  NC_002947/2339888‑2340181                                                                                                                                                    |                                                                                                                                                   gcggcagcaccggctcggtggaggaagtacccagcaccacgaggaactcttcgcggaaatagcgcagcaacttccacaggctgaagccatgggcgcggcagatgccaccgagcaccaccagcacgaagaaggcgcaggcgatgtacaACg                                                                                                                                                  <  1:543591‑M1/3‑1 (MQ=255)     cagcaccggctcggtggaggaagtacccagcaccacgaggaactcttcgcggaaatagcgcagcaacttccacaggctgaagccatgggcgcggcagatgccaccgagcaccaccagcacgaagaaggcgcaggcgatgtacaACGTccc                                                                                                                                              >  1:140118‑M1/144‑150 (MQ=255)            cGAAAAGGGCAAGCCGGTACTGGACGTGCTGGAGTCGGCCTCGACCATGGTGTTTCGCATCTTCGGCTACCTGATGCGCTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGgcgc                                                                                                                                       <  2:1318481/150‑1 (MQ=255)             gctcggtggaggaagtacccagcaccacgaggaactcttcgcggaaatagcgcagcaacttccacaggctgaagccatgggcgcggcagatgccaccgagcaccaccagcacgaagaaggcgcaggcgatgtacaa                                                                                                                                                    >  1:682525‑M1/136‑136 (MQ=255)             gctcggtggaggaagtacccagcaccacgaggaactcttcgcggaaatagcgcagcaacttccacaggctgaagccatgggcgcggcagatgccaccgagcaccaccagcacgaagaaggcgcaggcgatgtacaa                                                                                                                                                    <  2:682525‑M1/1‑1 (MQ=255)              aaaaGGGCAAGCCGGTACTGGACGTGCTGGAGTCGGCCTCGACCATGGTGTTTCGCATCTTCGGCTACCTGATGCGCTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCGAGTACGGGATTCCGTCCCTTGtcgcgc                                                                                                                                     >  1:657476/1‑150 (MQ=255)              aaaaGGGCAAGCCGGTACTGGACGTGCTGGAGTCGGCCTCGACCATGGTGTTTCGCATCTTCGGCTACCTGATGCGCTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGgcgcgc                                                                                                                                     >  2:653522/1‑150 (MQ=255)                       aGCCGGTACTGGACGTGCTGGAGTCGGCCTCGACCATGGTGTTTCGCATCTTCGGCTACCTGATGCGCTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGc                                                                                                                            <  2:1176924/150‑1 (MQ=255)                         ccGGTACGGGACGTGCTGGAGTCGGCCTCGACCATGGTGTTTCGCATCTTCGGCTACCTGATGCGCTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTg                                                                                                                          <  2:180692/150‑1 (MQ=255)                                  gACGTGCTGGAGTCGGCCTCGACCATGGTGTTTCGCATCTTCGGCTACCTGATGCGCTTTGCCCCGATCGGCGTTTGGTTCGCACTGGCATTCACCGTGGGCAAGAAGAAGATTGCGGGCCTTTGCGCGCTGGCCAAACTGGTAGGGagg                                                                                                                 >  1:318930/1‑148 (MQ=255)                                     ccacgaggaactcttcgcggaaatagcgcagcaacttccacaggctgaagccatgggcgcggcagatgccaccgagcaccaccagcacgaagaaggcgcaggcgatgtacaACTTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTg                                                                                                              >  2:578458‑M1/112‑150 (MQ=255)                                         tGGAGTCGGCCTCGACCATGGTGTTTCGCATCTTCGGCTACCTGATGCGCTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACa                                                                                                          >  1:551732/1‑150 (MQ=255)                                         tGGAGTCGGCCTCGACCATGGTGTTTCGCATCTTCGGCTACCTGATGCGCTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACa                                                                                                          >  1:551951/1‑150 (MQ=255)                                          ggAGTCGGCCTCGACCATGGTGTTTCGCATCTTCGGCTACCTGATGCGCTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACAt                                                                                                         <  1:653522/150‑1 (MQ=255)                                                ggCCTCGACCATGGTGTTTCGCATCTTCGGCTACCTGATGCGCTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTg                                                                                                   >  1:381360/1‑150 (MQ=255)                                                         cATGGTGTTTCGCATCTTCGGCTACCTGATGCGCTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCcttctt                                                                                          <  2:614113/150‑1 (MQ=255)                                                          aTGGTGTTTCGCATCTTCGGCTACCTGATGCGCTTTGCCCCGATCGGCGCTTTCGCCCCCCTCCCCTTCCCCCCCCCCCCCTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCttcttc                                                                                         >  1:530656/1‑150 (MQ=255)                                                                tttCGCATCTTCGGCTACCTGATGCGCTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCtg                                                                                   <  1:1171892/150‑1 (MQ=255)                                                                    gCATCTTCGGCTACCTGATGCGCTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCtggtgg                                                                               >  1:1282000/1‑150 (MQ=255)                                                                        cTTCGGCTACCTGATGCGCTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTAAGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCt                                                                           <  2:759906/150‑1 (MQ=255)                                                                          tCGGCTACCTGATGCGCTTTGCCCCGATCGGCGCTTTCTGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCg                                                                         <  1:1079034/150‑1 (MQ=255)                                                                                  cTGATGCGCTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTgcgc                                                                                                <  1:1140717/119‑1 (MQ=255)                                                                                  cTGATGCGCTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTgcgc                                                                                                >  2:1140717/1‑119 (MQ=255)                                                                                   tGATGCGCTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGt                                                                                                                <  1:71434/102‑1 (MQ=255)                                                                                   tGATGCGCTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGt                                                                                                                >  2:71434/1‑102 (MQ=255)                                                                                      tGCGCTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGcc                                                             >  2:861354/1‑150 (MQ=255)                                                                                        catgggcgcggcagatgccaccgagcaccaccagcacgaagaaggcgcaggcgatgtacaACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGa                                                                                                                   <  2:160779‑M1/34‑1 (MQ=255)                                                                                        catgggcgcggcagatgccaccgagcaccaccagcacgaagaaggcgcaggcgatgtacaACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGa                                                                                                                   >  1:160779‑M1/61‑94 (MQ=255)                                                                                          cTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCgcgc                                                         <  2:1282000/150‑1 (MQ=255)                                                                                                cccGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTg                                                                      >  2:548943/1‑131 (MQ=255)                                                                                                cccGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTg                                                                      <  1:548943/131‑1 (MQ=255)                                                                                                       ggCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGc                                            <  1:789319/150‑1 (MQ=255)                                                                                                         cgcTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGCCt                                          >  2:1042488/1‑150 (MQ=255)                                                                                                                     aCTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGc                                                              <  1:32507/118‑1 (MQ=255)                                                                                                                     aCTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGc                                                              >  2:32507/1‑118 (MQ=255)                                                                                                                       tGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTg                                                                      >  1:260657/1‑108 (MQ=255)                                                                                                                       tGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTg                                                                      <  2:260657/108‑1 (MQ=255)                                                                                                                           aTTCACCGTGGGCGAGTACGGGATTACGTCCCTTGGCGCGCTGACCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGCCTGTGGAAGTTGCTGCGCTa                        >  2:86704/1‑150 (MQ=255)                                                                                                                           aTTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGCCTGTGGAAGTTGCTGCGCTa                        >  1:1376606/1‑150 (MQ=255)                                                                                                                               aCCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGCCTGTGGAAGTTGCTGCGCTATTTc                    >  2:392311/1‑150 (MQ=255)                                                                                                                                  gTGGGCCAGTACGGGATTACGTCCCTTGGGGCGTTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGCCTGTGGAAGTTGCTGCGCTATTTCcgc                 <  2:579852/150‑1 (MQ=255)                                                                                                                                    gggCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCa                                                      >  2:1091245/1‑111 (MQ=255)                                                                                                                                    gggCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCa                                                      <  1:1091245/111‑1 (MQ=255)                                                                                                                                     ggCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGCCTGTGGAAGTTGCTGCGCTATTTCCGCGaa              <  1:1042488/150‑1 (MQ=255)                                                                                                                                       ccAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGACACCATGGCTTCAGCCTGTGGAAGTTGCTGCGCTATTTCCGCGAaga            >  2:543591/1‑150 (MQ=255)                                                                                                                                        cAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGCCTGTGGAAGTTGCTGCGCTATTTCCGCGAagag           >  2:492344/1‑150 (MQ=255)                                                                                                                                           tACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGCCTGTGGAAGTTGCTGCGCTATTTCCGCGAAGAGTTc        >  2:451915/1‑150 (MQ=255)                                                                                                                                                gagtACGTCCCTTGGCGCGCTCGCCAAGCTGGTCGGGACGTTGTACCTCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGCCTGTTGAAGTTGCTGCGCTATTTCCGCGAAGAGTTCCTCgc   <  2:318930/147‑2 (MQ=255)                                                                                                                                                 aTTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGCCTGTGGAAGTTGCTGCGCTATTTCCGCGAAGAGTTCCTCgtg  <  2:1258158/150‑1 (MQ=255)                                                                                                                                                 aTTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGCCTGTGGAAGTTGCTGCGCTATTTCCGCGAAGAGTTCCTCgtg  <  1:861354/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                   TCGTCGATGGGCGAAAAGGGCAAGCCGGTACTGGACGTGCTGGAGTCGGCCTCGACCATGGTGTTTCGCATCTTCGGCTACCTGATGCGCTTTGCCCCGATCGGCGCTTTCGGCGCACTGGCATTCACCGTGGGCCAGTACGGGATTACGTCCCTTGGCGCGCTGGCCAAGCTGGTCGGGACGTTGTACATCGCCTGCGCCTTCTTCGTGCTGGTGGTGCTCGGTGGCATCTGCCGCGCCCATGGCTTCAGCCTGTGGAAGTTGCTGCGCTATTTCCGCGAAGAGTTCCTCGTG  >  NC_002947/2339888‑2340181

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.