| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2410758 = | 50 (0.950) | 3 (0.060) | 3/232 | NT | 6.2% | coding (733/2742 nt) | acnA‑I | aconitate hydratase |
| ? | NC_002947 | 2410803 = | 44 (0.890) | coding (688/2742 nt) | acnA‑I | aconitate hydratase | |||||
GACCCGTGAGGCCGACGGCCGCACCTATGCCTTCCCCGATACCTTGGTGGGCACAGACTCGCACACCACCATGATCAACGGCCTGGGCGTACTCGGCTGGGGTGTCGGCGGCATCGAAGCGGAAGCGGCCATGCTCGGCCAGCCGGTATCGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2410912‑2410758‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatgcCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGAGTCTGTGCCCACCAAGGTATCGGGGAAGGCATAGGTGCGGCCGTCGGCCTCACGGGTCCACACCGTGCGGCCCAGGTATTCCAGGTTGACCTGG > NC_002947/2410803‑2410948 GACCCGTGAGGCCGACGGCCGCACCTATGCCTTCCCCGATACCTTGGTGGGCACAGACTCGCACACCACCATGATCAACGGCCTGGGCGTACTCGGCTGGGGTGTCGGCTGCATCGAAGCGGAAGCGGCCATGCTCGGCCAGCCGGTATC > 2:1381023/1‑150GACCCGTGAGGCCGACGGCCGCACCTATGCCTTCCCCGATACCTTGGTGGGCACAGACTCGCACACCACCATGATCAACGGCCTGGGCGTACTCGGCTGGGGTGTCGGCGGCATCGAAGCGGAAGCGGCCATGCTCGGCCAGCCGGTATC > 2:793312/1‑150GACCCGTGAGGCCGACGGCCGCACCTATGCCTTCCCCGATACCTTGGTGGGCACAGACTCGCACACCACCATGATCAACGGCCTGGGCGTACTCGGATCACGCTGCGGCGGCATCGAAGCGGAAGCGGCCATGCTGGGCCAGCCGGTATC > 1:87833/1‑150 ACAGACTCGCACACCACCATGATCAACGGCCTGGGCGTACTCGGCTGGGGTGTCGGCGGCATCGAGGCGGAAGCGGCCATGCTCGGCCAGCCGGTAT < 1:1146428/97‑1 ACAGACTCGCACACCACCATGATCAACGGCCTGGGCGTACTCGGCTGGGGTGTCGGCGGCATCGAGGCGGAAGCGGCCATGCTCGGCCAGCCGGTAT > 2:1146428/1‑97 ACGGCCTGGGCGTACTCGGCTGGGGTGTCGGCGGCATCGAAGCGGAAGCGGCCATGCTCGGCCAGCCGGTATCGA > 1:523304/1‑75 ACGGCCTGGGCGTACTCGGCTGGGGTGTCGGCGGCATCGAAGCGGAAGCGGCCATGCTCGGCCAGCCGGTATCGA < 2:523304/75‑1 CGGCATCGAAGCGGAAGCGGCCATGCTCGGCCAGCCGGTATCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGAGTCTGTGCCCACCAAGGTATCGGGGAAGGCATAGGTGCGGCCGTCGGCCTC > 2:580907/1‑150 ATGCTCGGCCAGCCGGTATCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGA < 1:402220/77‑1 ATGCTCGGCCAGCCGGTATCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGA > 2:402220/1‑77 TATCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGAGTCTGTGCCCACCAAGGTATCGGGGAAGGCATAGGTGCGGCCGTCGGCCTCACGGGTCCACACCGTGCGGCCCAGGTATTCCAGGTTGA < 1:580907/150‑1 ATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGAGTCTGTGCCCACCAAGGTATCGGGGAAGGCATAGGTGCGGCCGTCGGCCTCACGGGTCCACACCGTGCGGCCCAGGTATTCCAGGTTGACCTGG < 1:982439/150‑1 GACCCGTGAGGCCGACGGCCGCACCTATGCCTTCCCCGATACCTTGGTGGGCACAGACTCGCACACCACCATGATCAACGGCCTGGGCGTACTCGGCTGGGGTGTCGGCGGCATCGAAGCGGAAGCGGCCATGCTCGGCCAGCCGGTATCGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2410912‑2410758‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatgcCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGAGTCTGTGCCCACCAAGGTATCGGGGAAGGCATAGGTGCGGCCGTCGGCCTCACGGGTCCACACCGTGCGGCCCAGGTATTCCAGGTTGACCTGG > NC_002947/2410803‑2410948 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |