New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2410758 =	50 (0.950)	3 (0.060)	3/232	NT	6.2%	coding (733/2742 nt)	acnA‑I	aconitate hydratase
	?	NC_002947	2410803 =	44 (0.890)					coding (688/2742 nt)	acnA‑I	aconitate hydratase

TCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGAGTCTGTGCCCACCAAGGTATCGGGGAAGGCATAGGTGCGGCCGTCGGCCTCAC  >  NC_002947/2410610‑2410907                                                                                                                                                     |                                                                                                                                                      tCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGc                                                                                                                                                      >  1:421786/1‑150 (MQ=255) tCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGc                                                                                                                                                      >  2:479966/1‑150 (MQ=255)   ccaggtcaacctggaatacctgggccgcacggtgtggacccgtgaggccgacggccgcacctatgccttccccgataccttggtgggcacagactcgcacaccaccatgatcaacggcctgggcgtactcggctggggtgtcggcgGCAt                                                                                                                                                    <  1:982439‑M1/4‑1 (MQ=255)     ccAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCTCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCg                                                                                                                                                  >  1:313287/1‑150 (MQ=255)        tcaacctggaatacctgggccgcacggtgtggacccgtgaggccgacggccgcacctatgccttccccgataccttggtgggcacagactcgcacaccaccatgatcaacggcctgggcgtactcggctggggtgtcggcgGCATCGATa                                                                                                                                               <  1:580907‑M1/9‑1 (MQ=255)         gCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATAc                                                                                                                                              <  1:423598/150‑1 (MQ=255)         cccGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATAc                                                                                                                                              <  2:1012450/149‑1 (MQ=255)            gTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGACGGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCgg                                                                                                                                           >  1:1381023/1‑150 (MQ=255)             gccccGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGc                                                                                                                                          >  2:978949/2‑150 (MQ=255)              ccccGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCt                                                                                                                                         >  2:1411885/1‑150 (MQ=255)                ccGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACAGGCTga                                                                                                                                       >  2:221/1‑149 (MQ=255)                            acgaACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGcc                                                                                                                           >  2:806672/1‑150 (MQ=255)                                 cTTGCCCACCCCGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCAACGAAGGAGTTGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGccgcttc                                                                                                                      <  2:1107674/150‑1 (MQ=255)                                     cccACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGccgcttccgct                                                                                                                  <  2:421786/150‑1 (MQ=255)                                      ccaccaCGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGccgcttccgctt                                                                                                                 >  1:35158/1‑150 (MQ=255)                                      ccaccaCGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGccgcttccgctt                                                                                                                 >  2:965098/1‑150 (MQ=255)                                        accacGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCAGATCACTTCGGGGATCAGCATCTATACCGGCTGGCCGAGCATGGGAGCTTCAGCTTCg                                                                                                               >  2:944856/1‑150 (MQ=255)                                          cacGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGAt                                                                                                             <  1:965098/150‑1 (MQ=255)                                             gCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATgcc                                                                                                          >  2:512221/1‑150 (MQ=255)                                              gaggccgacggccgcacctatgccttccccgataccttggtgggcacagactcgcacaccaccatgatcaacggcctgggcgtactcggctggggtgtcggcgGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATgccg                                                                                                         >  2:580907‑M1/104‑150 (MQ=255)                                                tttCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGa                                                                                                              >  1:1110557/1‑143 (MQ=255)                                                tttCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGa                                                                                                              <  2:1110557/143‑1 (MQ=255)                                                  tCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGa                                                                                                     <  1:944856/150‑1 (MQ=255)                                                  tCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCACCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGa                                                                                                     <  1:95368/150‑1 (MQ=255)                                                    ttGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGaca                                                                                                   >  1:257578/1‑150 (MQ=255)                                                        gcagcaTCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACAcccc                                                                                               >  1:793312/1‑150 (MQ=255)                                                              tCTGTGTCACGGTCAGCACCAGGTCAGTGTCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCTGCCGACACCCCAGCCGa                                                                                         <  2:469226/150‑1 (MQ=255)                                                                  tgtCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTAc                                                                                     <  1:479966/150‑1 (MQ=255)                                                                      aCGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAg                                                                                                                                                       >  1:1002474/1‑80 (MQ=255)                                                                      aCGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAg                                                                                                                                                       <  2:1002474/80‑1 (MQ=255)                                                                      aCGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGccc                                                                                 <  1:1411885/150‑1 (MQ=255)                                                                             ggacaaGGTCAGTGGCAGTGAGGCCCTCCCGGAGCTTGCCGGTCAGCTTGAAGCCGATCACTGCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTCCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGt                                                                          >  2:1155977/6‑150 (MQ=255)                                                                                     tCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCAtg                                                                  <  2:35158/150‑1 (MQ=255)                                                                                      cAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCAtgg                                                                 <  2:257578/150‑1 (MQ=255)                                                                                       aGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCAtggt                                                                >  2:916869/1‑150 (MQ=255)                                                                                         tGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCAtggtgg                                                              >  2:401332/1‑150 (MQ=255)                                                                                            cAGTGATGCCCTCCCGCAGCTTGCTGCATACGTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGgtgt                                                           <  1:221/150‑1 (MQ=255)                                                                                                gATGCCCTCCCGCAGCTTGCCGGTCAGCTTAAAGCCGATCACTTCGGGGATCAGCATCGATACTGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGa                                                       <  1:1402135/150‑1 (MQ=255)                                                                                                 tcgcacaccaccatgatcaacggcctgggcgtactcggctggggtgtcggcgGCATCGATACCGGCTGGCCGAGCAt                                                                                                                               >  2:402220‑M1/53‑77 (MQ=255)                                                                                                 tcgcacaccaccatgatcaacggcctgggcgtactcggctggggtgtcggcgGCATCGATACCGGCTGGCCGAGCAt                                                                                                                               <  1:402220‑M1/25‑1 (MQ=255)                                                                                                     ccTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGAGTCtg                                                  >  2:1028781/1‑150 (MQ=255)                                                                                                      cTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCa                                                                                              <  2:781013/105‑1 (MQ=255)                                                                                                      cTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCa                                                                                              >  1:781013/1‑105 (MQ=255)                                                                                                       tCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACAccc                                                                                                <  2:547663/102‑1 (MQ=255)                                                                                                       tCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACAccc                                                                                                >  1:547663/1‑102 (MQ=255)                                                                                                       tCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGAGTCtgtg                                                >  1:1200613/1‑150 (MQ=255)                                                                                                       ccccGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGAGTCtgtg                                                <  2:1289287/149‑1 (MQ=255)                                                                                                           gCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGAGTCTGTGCcca                                            >  1:1286472/1‑150 (MQ=255)                                                                                                                ttGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGAGTCTGTGCCCACCAAg                                       >  1:1003974/1‑150 (MQ=255)                                                                                                                        cAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATTGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGAGTCTGTGCCCACCAAGGTATCggg                               <  1:1363992/150‑1 (MQ=255)                                                                                                                           cTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTCAATCATGGTGGTGTGCGAGTCCGTGCCCACCAAGGTATCGGGGaa                            >  1:1306033/1‑150 (MQ=255)                                                                                                                                 gCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGGCCCATACTCCCAGGCCGTTGATCATGGTGGTGTGCGAGTCTGTGCCCACCAAGGTATCGGGGAAGGCATa                      >  1:88351/1‑150 (MQ=255)                                                                                                                                 gCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGa                                                       <  1:1243368/117‑1 (MQ=255)                                                                                                                                 gCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGa                                                       >  2:1243368/1‑117 (MQ=255)                                                                                                                                    gATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGAGTCTGTGCCCACCAATGTATCGGGTAAGGCATATGt                   <  2:1003974/150‑1 (MQ=255)                                                                                                                                    gATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGAGTCTGTGCCCACCAAGGTATCGGGGaa                            <  2:1105254/141‑1 (MQ=255)                                                                                                                                    gATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGAGTCTGTGCCCACCAAGGTATCGGGGaa                            >  1:1105254/1‑141 (MQ=255)                                                                                                                                      tCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGAGTCTGTGCCCACCAAGGTATCGGGGAAGGCATAGGTGc                 <  1:401332/150‑1 (MQ=255)                                                                                                                                          ttCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGAGTCTGTGCCCACCAAGGTATCGGGGAAGGCATAGGTGCGGcc             >  1:718472/1‑150 (MQ=255)                                                                                                                                                     gCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGAGCGCCTCGTTGGGGTGCGAGTCTGTGCCCACCAAGATATCGGGGCAGGTATCGGAAAGGCCGTCGGCCTCAc  >  1:88165/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                      TCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGATCACTTCGGGGATCAGCATCGATACCGGCTGGCCGAGCATGGCCGCTTCCGCTTCGATGCCGCCGACACCCCAGCCGAGTACGCCCAGGCCGTTGATCATGGTGGTGTGCGAGTCTGTGCCCACCAAGGTATCGGGGAAGGCATAGGTGCGGCCGTCGGCCTCAC  >  NC_002947/2410610‑2410907

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.