| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2494230 = | 33 (0.630) | 3 (0.060) | 3/224 | NT | 9.4% | coding (451/864 nt) | PP_2187 | universal stress protein family protein |
| ? | NC_002947 | 2494274 = | 28 (0.590) | coding (407/864 nt) | PP_2187 | universal stress protein family protein | |||||
TGCGGTGCTGATGGTCAAGAGCGAGCGGCCATGGACCGGGGGCAAGATCCTGGCGGCGGTGGACGTGGGCAACCAGGACGAAGACCACCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2494324‑2494230‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccgccgccAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTCCTTGATCACCAGTTCGCAGCC > NC_002947/2494274‑2494422 TGCGGTGCTGATGGTCAAGAGCGAGCGGCCATGGACCGGGGGCAAGATCCTGGCGGCGGTGGACGTGGGCAACCAGGACGAAGAC < 1:807450/85‑1TGCGGTGCTGATGGTCAAGAGCGAGCGGCCATGGACCGGGGGCAAGATCCTGGCGGCGGTGGACGTGGGCAACCAGGACGAAGAC > 2:807450/1‑85 CAAGATCCTGGCGGCGGTGGACGTGGGCAACCAGGACGAAGACCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGG > 2:626164/1‑150 GGTGGACGTGGGCAACCAGGACGAAGACCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGG > 1:339407/1‑123 GGTGGACGTGGGCAACCAGGACGAAGACCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGG < 2:339407/123‑1 CACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTCCTTGATCACCAG > 1:390199/1‑150 CCGCCGCCTGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTCC < 1:769990/137‑1 CCGCCGCCTGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTCC > 2:769990/1‑137 GCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTCCTTGATCACCAGTTCG < 2:314180/150‑1 CCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTCCTTGATCACCAGTTCGCAGC > 1:700353/1‑150 CAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTCCTTGATCACCAGTTCGCAGCC > 1:418156/1‑150 TGCGGTGCTGATGGTCAAGAGCGAGCGGCCATGGACCGGGGGCAAGATCCTGGCGGCGGTGGACGTGGGCAACCAGGACGAAGACCACCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2494324‑2494230‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccgccgccAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTCCTTGATCACCAGTTCGCAGCC > NC_002947/2494274‑2494422 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |