New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2494230 =	33 (0.630)	3 (0.060)	3/224	NT	9.4%	coding (451/864 nt)	PP_2187	universal stress protein family protein
	?	NC_002947	2494274 =	28 (0.590)					coding (407/864 nt)	PP_2187	universal stress protein family protein

GCTGACAGCATCGGCGACGGGTGGGCACTGATGACGTGCAGTTCTCCCTTGGCCAGTTTGGCAATCTCGAAGCCGTGGTCGATGATGCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTCCTTGATCACCAGTTCGCAGCCT  >  NC_002947/2494133‑2494423                                                                                                                                              |                                                                                                                                                      ccctgctcacccccagcgactggaagctgctgcgccaatgtccgtgtgcggtgctgatggtcaagagcgagcggccatggaccgggggcaagatcctGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTg                                                                                                                                               >  2:626164‑M1/98‑150 (MQ=255)        ggaTCGGCGACGGGTGGTCACTGATGACGTGCAGTTCTCCCTTGGCCAGTTTGGCAATCTCGAAGGCGTGGTCGATGATGCTGGCATGCAGGCGGCGGTGGTCTTCGTGCCGGTTGCACACGTCCACCGCCGCCAGGATCTTGCCCCCgg                                                                                                                                        <  1:114057/148‑1 (MQ=255)         cATCGGCGACGGGTGGGCACTGATGACGTGCAGTTCTCCCTTGGCCAGTTTGGCAATCTCGAAGCCGTGGTCGATGATGCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGt                                                                                                                                       >  1:298238/1‑150 (MQ=255)         cATCGGCGACGGGTGGGCACTGATGACGTGCAGTTCTCCCTTGGCCAGTTTGGCAATCTCGAAGCCGTGGTCGATGATGCGGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGGTCTTGCCCCCGGt                                                                                                                                       >  1:314180/1‑150 (MQ=255)           tCGGCGACGGGTGGGCACTGATGACGTGCAGTTCTCCCTTGGCCAGTTTGGCAATCTCGAAGCCGTGGTCGATGATGCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTcc                                                                                                                                     >  1:184535/1‑150 (MQ=255)             ggCGACGGGTGGGCACTGATGACGTGCAGTTCTCCCTTGGCCAGTTTGGCAATCTCGAAGCCGTGGTCGATGCTGATCGACTGAAGGCGGCGGTGCTCTTCGTCCTAGTTGCCCACGTCCACCTTTGTCAGGATCTTGCCCCCGGTCCAt                                                                                                                                   <  2:1231447/150‑1 (MQ=255)             ggCGACGGGTGGGCACTGATGACGTGCAGTTCTCCCTTGGCCAGTTTGGCAATCTCGAAGCCGTGGTCGATGATGCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCAt                                                                                                                                   <  2:184535/150‑1 (MQ=255)             ggCGACGGGTGGGCACTGATGACGTGCAGTTCTCCCTTGGCCAGTTTGGCAATCTCGAAGCCGTGGTCGATGATGCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCAt                                                                                                                                   <  1:575901/150‑1 (MQ=255)                     gTGGGCACTGATGACGTGCAGTTCTCCCTTGGCCAGTTTGGCAATCTCGAAGCCGTGGTCGATGATGCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCcgctc                                                                                                                           <  2:207028/150‑1 (MQ=255)                          cACTGATGACGTGCAGTTCTCCCTTGGCCAGTTTGGCAATCTCGAAGCCGTGGTCGATGATGCTGGCATGCAGGCGACGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGctct                                                                                                                      >  1:451361/1‑150 (MQ=255)                                tgaCGTGCAGTTCTCCCTTGGCCAGTTTGGCAATCTCGAAGCCGTGGTCGATGATGCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCa                                                                                                                <  1:1048811/150‑1 (MQ=255)                                               ccTTGGCCAGTTTGGCAATCTCGAAGCCGTGGTCGATGATGCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACg                                                                                                 >  1:622611/1‑150 (MQ=255)                                                           tGGCAATCTCGAAGCCGTGGTCGATGATGCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCgca                                                                                     <  2:622611/150‑1 (MQ=255)                                                             gCAATCTCGAAGCCGTGGTCGATGATGCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGAACCGCACACGGACATTTGCgcagc                                                                                   >  1:68980/1‑150 (MQ=255)                                                                     gAAGCCGTGGTCGATGATGCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTcaa                                                                           >  1:420571/1‑148 (MQ=255)                                                                        gCCGTGGTCGATGATGCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAg                                                                                                                                                      >  2:159347/1‑72 (MQ=255)                                                                        gCCGTGGTCGATGATGCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAg                                                                                                                                                      <  1:159347/72‑1 (MQ=255)                                                                           gTGGTCGATGATGCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTg                                                                                          >  2:1067858/1‑129 (MQ=255)                                                                           gTGGTCGATGATGCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTg                                                                                          <  1:1067858/129‑1 (MQ=255)                                                                            tGGTCGATGATGCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTg                                                                    >  2:229871/1‑150 (MQ=255)                                                                                 gatgatGCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTgggg                                                                 >  2:712701/1‑148 (MQ=255)                                                                                 gatgatGCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTgggg                                                                 <  1:712701/148‑1 (MQ=255)                                                                                    gatgCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGca                                                                                                     <  2:981760/109‑1 (MQ=255)                                                                                    gatgCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGca                                                                                                     >  1:981760/1‑109 (MQ=255)                                                                                         caagatcctggcggcggtggacgtgggcaaccaggacgaagaccaccgccgccAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAggg                                                       >  2:626164‑M2/54‑150 (MQ=255)                                                                                                        ggtggacgtgggcaaccaggacgaagaccaccgccgccAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTgg                                                                   >  1:339407‑M2/39‑123 (MQ=255)                                                                                                        ggtggacgtgggcaaccaggacgaagaccaccgccgccAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTgg                                                                   <  2:339407‑M2/85‑1 (MQ=255)                                                                                                            GTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGca                                                                                                     <  1:807450‑M1/85‑1 (MQ=255)                                                                                                            GTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGca                                                                                                     >  2:807450‑M1/1‑85 (MQ=255)                                                                                                              cTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTgg                                                                                         <  2:199101/95‑1 (MQ=255)                                                                                                              cTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTgg                                                                                         >  1:199101/1‑95 (MQ=255)                                                                                                                   tCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCgg                             >  2:316928/1‑150 (MQ=255)                                                                                                                      tGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCggtgg                          >  1:431622/1‑150 (MQ=255)                                                                                                                         ttGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTcc                       >  1:703953/1‑150 (MQ=255)                                                                                                                          tGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTCCt                      <  2:298238/150‑1 (MQ=255)                                                                                                                             ccACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGGCCTTGa                   >  1:59037/1‑150 (MQ=255)                                                                                                                               atctCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCGAGTCGCTGGGGTTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTCCTTGATc                 <  2:1194805/147‑1 (MQ=255)                                                                                                                               aCGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTCCTTGATc                 <  1:316928/150‑1 (MQ=255)                                                                                                                                    caccgccgccAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTCCTTGATCACCAg            >  1:390199‑M2/11‑150 (MQ=255)                                                                                                                                      ccgccgccTGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTcc                       >  2:769990‑M2/9‑137 (MQ=255)                                                                                                                                      ccgccgccTGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTcc                       <  1:769990‑M2/129‑1 (MQ=255)                                                                                                                                        gccgccAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTCCTTGATCACCAGTTCg        <  2:314180‑M2/144‑1 (MQ=255)                                                                                                                                            ccAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTCCTTGATCACCAGTTCGCAGc    >  1:700353‑M2/3‑150 (MQ=255)                                                                                                                                             cAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTCCTTGATCACCAGTTCGCAGcc   >  1:418156‑M2/2‑150 (MQ=255)                                                                                                                                              aGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTCCTTGATCACCAGTTCGCAGCCt  >  2:885730/1‑150 (MQ=255)                                                                                                                                              |                                                                                                                                                      GCTGACAGCATCGGCGACGGGTGGGCACTGATGACGTGCAGTTCTCCCTTGGCCAGTTTGGCAATCTCGAAGCCGTGGTCGATGATGCTGGCATGCAGGCGGCGGTGGTCTTCGTCCTGGTTGCCCACGTCCACCGCCGCCAGGATCTTGCCCCCGGTCCATGGCCGCTCGCTCTTGACCATCAGCACCGCACACGGACATTGGCGCAGCAGCTTCCAGTCGCTGGGGGTGAGCAGGGCCTTTTTCAGCGGATTGTCCGGGCGGTGGTCCTTGATCACCAGTTCGCAGCCT  >  NC_002947/2494133‑2494423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.