| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2508407 | 43 (0.820) | 5 (0.100) | 5/234 | NT | 10.4% | coding (323/438 nt) | PP_2202 | membrane protein |
| ? | NC_002947 | = 2508421 | 45 (0.900) | coding (309/438 nt) | PP_2202 | membrane protein | |||||
CTGTAACAGGCAGTGGACCACGCGAAACCTGAAAGGTGTTACCAGGCGTGAAACCAGCCCAGGGTAATCATCGCAAGCACCGCATAGCGGCCAGCCTTGGCCAGGGTCACCAGCAACAGGAAGCGCCAGAATGGCTCACGCATTATCCCGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2508254‑2508407‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgaCCCGCTTACGCTGATCGCCGGGATAATGCGTGAGCCATTCTGGCGCTTCCTGTTGCTGGTGACCCTGGCCAAGGCTGGCCGCTATGCGGTGCTTGCGATGATTACCCTGGGCTGGTTTCACGCCTGGTAACACCTTTCAGGTTTCG < NC_002947/2508421‑2508276 CTGTAACAGGCAGTGGACCACGCGAAACCTGAAAGGTGTTACCAGGCGTGAAACCAGCCCAGGGTACTCATCGCAAGCACCGCATAGCGGCCAGCCTTGGCCAGGGTCACCAGCAACAGGAAGCGCCAGAATGGCTCACGCATTATCCCG < 1:781689/150‑1CTGTAACAGGCAGTGGACCACGCGAAACCTGAAAGGTGTTACCAGGCGTGAAACCAGCCCAGGGTAATCATCGCAAGCACCGCATAGCGGCCAGCCTTGGCCAGGGTCACCAGCAACAGGAAGCGCCAGAATGGCTCACGCATTATCCCG > 1:17741/1‑150 CAGGCAGTGGACCACGCGAAACCTGAAAGGTGTTACCAGGCGTGAAACCAGCCCAGGGTAATCATCGCAAGCACCGCATAGCGGCCAGCCTTGGCCAGGGTCACCAGCAACAGGAAGCGCCAGAATGGCTGACGCATTATCCCGGCGACC > 1:433689/1‑150 AAACCTGAAAGGTGTTACCAGGCGTGAAACCAGCCCAGGGTAATCATCGCAAGCACCGCATAGCGGCCAGCCTTGGCCAGGGTCACCAGCAACAGGAAGCGCCAGAATGGCTCACGCATTATCCCGGCGACCCGCTTACGCTGATCGCCG < 1:1366347/150‑1 AACCTGAAAGGTGTTACCAGGCGTGAAACCAGCCCAGGGTAATCATCGCAAGCACCGCATAGCGGCCAGCCTTGGCCAGGGTCACCAGCAACAGGAAGCGCCAGAATGGCTCACGCATTATCCCGGCGACCCGCTTACGCTGATCGCCGG < 1:1379317/150‑1 ACAGGAAGCGCCAGAATGGCTCACGCATTATCCCGGCGACCCGCTTACGCTGATCGCCGGGA > 1:1122871/1‑62 ACAGGAAGCGCCAGAATGGCTCACGCATTATCCCGGCGACCCGCTTACGCTGATCGCCGGGA < 2:1122871/62‑1 AGAATGGCTCACGCATTATCCCGGCGATCAGCGTAAGCGGGTCGCCGGGATAATGCGTGAGCCATTCTGGCGCTTCCTGTTGCTGGTGACCCTGGCCAAGGCTGGCCGCTATGCGGTGCTTGCGATGATTACCCTGGGCTGGTTTCACGC > 2:433689/1‑150 CGGCGACCCGCTTACGCTGATCGCCGGGATAATGCGTGAGCCATTCTGGCGCTTCCTGTTGCTGGTGACCCTGGCCAAGGCTGGCCGCTATGCGGTGCTTGCGATGATTACCCTGGGCTGGTTTCACGCCTGGTAACACCTTTCAGGTTT > 1:815621/1‑150 GGCGACCCGCTTACGCTGATCGCCGGGATAATGCGTGAGCCATTCTGGCGCTTCCTGTTGCTGGTGACCCTGGCCAAGGCTGGCCGCTATGCGGTGCTTGCGATGATTACCCTGGGCTGGTTTCACGCCTGGTAACACCTTTCAGGTTTC > 1:853968/1‑150 GCGACCCGCTTACGCTGATCGCCGGGATAATGCGTGAGCCATTCTGGCGCTTCCTGTTGCTGGTGACCCTGGCCAAGGCTGGCCGCTATGCGGTGCTTGCGATGATTACCCTGGGCTGGTTTCACGCCTGGTAACACCTTTCAGGTTTCG > 2:1346484/1‑150 CTGTAACAGGCAGTGGACCACGCGAAACCTGAAAGGTGTTACCAGGCGTGAAACCAGCCCAGGGTAATCATCGCAAGCACCGCATAGCGGCCAGCCTTGGCCAGGGTCACCAGCAACAGGAAGCGCCAGAATGGCTCACGCATTATCCCGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2508254‑2508407‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgaCCCGCTTACGCTGATCGCCGGGATAATGCGTGAGCCATTCTGGCGCTTCCTGTTGCTGGTGACCCTGGCCAAGGCTGGCCGCTATGCGGTGCTTGCGATGATTACCCTGGGCTGGTTTCACGCCTGGTAACACCTTTCAGGTTTCG < NC_002947/2508421‑2508276 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |