| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2651868 = | 64 (1.220) | 4 (0.080) | 4/238 | NT | 5.5% | coding (593/1113 nt) | aroF‑I | tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase |
| ? | NC_002947 | 2651914 = | 75 (1.480) | coding (547/1113 nt) | aroF‑I | tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase | |||||
GAATCGCAAACACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2651920‑2651868‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtttGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGCGAAATCGGGTCGAGCGCTTCGGTGGCGGTCGGCAGGCCCATTTCGGCC > NC_002947/2651914‑2652023 GAATCGCAAACACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTTGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGCGAAATCGGGTCGAGCGCTTC > 1:1166266/1‑135GAATCGCAAACACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTTGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGCGAAATCGGGTCGAGCGCTTC < 2:1166266/135‑1 CACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTTGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGCGAAATCGGGTCGAGCGCTTCGGTGGCGGTCGGCAGGCCAATTTCG > 2:683496/1‑150 ACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGTGTTTGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGCGAAATCGGGTCGAGCGCTTCGGTGGCGGTCGGCAGGCCCATTTCGGCC > 2:345266/1‑150 TTTGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGCGAAATCGG < 1:929450/73‑1 TTTGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGCGAAATCGG > 2:929450/1‑73 GAATCGCAAACACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2651920‑2651868‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtttGCGATTCGGTGGTGCGGGCACCGATGGCCGACCAGCTGATCAGGTCTTGCAGGTACTGCGGCGAAATCGGGTCGAGCGCTTCGGTGGCGGTCGGCAGGCCCATTTCGGCC > NC_002947/2651914‑2652023 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |