New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2696924 =	46 (0.880)	3 (0.060)	3/232	NT	6.9%	coding (782/972 nt)	PP_2363	hypothetical protein
	?	NC_002947	2697012 =	37 (0.750)					coding (870/972 nt)	PP_2363	hypothetical protein

CGTGCCGGTACCTACGCCGGGGTTGATGTCGGCATCCGTACTGGAACGCCTGGCAGCCCCGGACGCCCCCCAGCGCACGGTGCCGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2697012‑2696924 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcacGGGTAGCCAGGTGTTCAACTATAACGCCAAGGTCTATACCGATCAGGCGACACCGCCGGCTGCGAACTACACCGACAGTGTGATACTGGATGTGCAGTTCTGAACGGCGGTCAATACCCCCGAAGCAGCCGCCGCCTGTCGCGACGG  >  NC_002947/2697012‑2697158                                                                                                                                                                                                                                              CGTGCCGGTACCTACGCCGGGGTTGATGTCGGCATCCGTACTGGAACGCCTGGCAGCCCCGGACGCCCCCCAGCGCACGGTGCCGGCACGGGTAGCCAGGTGTTCAACTATAACGCCAAGGTCTATACCGATCAGGCGACACCGCCGGCT                                                                                        >  1:599026/1‑150  GTGCCGGTACCTACGCCGGGGTTGATGTCGGCATCCGTACTGGAACGCCTGGCAGCCCCGGACGCCCCCCAGCGCACGGTGCCGGCACGGGTAGCCAGGTGTTCAACTATAACGCCAAGGTCTATACCGATCAGGCGACACCGCCGGCTG                                                                                       >  1:363021/1‑150            CTACGCCGGGGTTGATGTCGGCATCCGTACTGGAACGCCTGGCAGCCCCGGACGCCCCCCAGCGCACGGTGCCGGCACGGGTAGCCAGGTGTTCAACTATAACGCCAAGGTCTATACCGATCAGGCGACACCGCCGGCTGCGAACTACAC                                                                             <  2:363021/150‑1                                                                                      GCACGGGTAGCCAGGTGTTCAACTATAACGCCAAGGTCTATACCGATCAGGCGACACCGCCGGCTGCGAACTACACCGACAGTGTGATACTGGATGTGCAGTTCTGAACGGCGGTCAATACCCCCGAAGCAGCCGCCGCCTGTC         >  1:490723/1‑144                                                                                      GCACGGGTAGCCAGGTGTTCAACTATAACGCCAAGGTCTATACCGATCAGGCGACACCGCCGGCTGCGAACTACACCGACAGTGTGATACTGGATGTGCAGTTCTGAACGGCGGTCAATACCCCCGAAGCAGCCGCCGCCTGTC         <  2:490723/144‑1                                                                                       CACGGGTAGCCAGGTGTTCAATTATATCGACAAGGTCTATACCGATCAGGCGGCACCGCGGGCTGCGAACTACACCGACAGTGTGATACTGGATGTGCAGTTCTGAACGGCGGTCAATACCCCCGAAGCAGCCGCCGCCTGTCGCGACGG  <  2:622139/150‑1                                                                                                                                                                                                                                              CGTGCCGGTACCTACGCCGGGGTTGATGTCGGCATCCGTACTGGAACGCCTGGCAGCCCCGGACGCCCCCCAGCGCACGGTGCCGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2697012‑2696924 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcacGGGTAGCCAGGTGTTCAACTATAACGCCAAGGTCTATACCGATCAGGCGACACCGCCGGCTGCGAACTACACCGACAGTGTGATACTGGATGTGCAGTTCTGAACGGCGGTCAATACCCCCGAAGCAGCCGCCGCCTGTCGCGACGG  >  NC_002947/2697012‑2697158

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.