| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2832716 = | 69 (1.310) | 10 (0.200) | 8/232 | NT | 14.1% | intergenic (‑21/+46) | PP_2485/PP_2486 | hypothetical protein/Oye family NADH‑dependent flavin oxidoreductase |
| ? | NC_002947 | 2832764 = | 57 (1.150) | coding (1123/1125 nt) | PP_2486 | Oye family NADH‑dependent flavin oxidoreductase | |||||
CCAACAACTGGCCGCTTAACCCAGTTGATCCAAGCAGCATGTACGGCGGTACCGATAAGGGCTACACCGACTACCCGACTTACAAATCCTAAACGCTCAATGCCACGCCCCATAACTCAGGGGCGTGGC‑‑TCAGCGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2832853‑2832716‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgtttAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGATACGAGCGGGCAGGTCGGGGTTCGCAATGAAGGGGCGACCAAAAGCGATCAGGTC > NC_002947/2832764‑2832911 CCAACAACTGGCCGCTTAACCCAGTTGATCCAAGCAGCATGTACGGCGGTACCGATAAGGGCTACACCGACTACCCGACTTACAAATCCTAAACGCTCAATGCCACGCCCCATAACTCAGGGGCGTGGC‑‑TCAGC > 1:1199009/1‑134CCAACAACTGGCCGCTTAACCCAGTTGATCCAAGCAGCATGTACGGCGGTACCGATAAGGGCTACACCGACTACCCGACTTACAAATCCTAAACGCTCAATGCCACGCCCCATAACTCAGGGGCGTGGC‑‑TCAGC < 2:1199009/134‑1 TCCTAAACGCTCAATGCCACGCCCCATAACTCAGGGGCGTGGC‑‑TCAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGATACGA > 1:1419131/1‑150 CTAAACGCTCAATGCCACGCCCCATAACTCAGGGGCGTGGC‑‑TCAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGATACGAGC > 1:407592/1‑150 CTAAACGCTCAATGCCACGCCCCATAACTCAGGGGCGTGGC‑‑TCAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGATACGAGC > 2:736777/1‑150 TAAACGCTCAATGCCACGCCCCATAACTCAGGGGCGTGGC‑‑TCAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGATACGAGCG > 1:437296/1‑150 TAAACGCTCAATGCCACGCCCCATAACTCAGGGGCGTGGC‑‑TCAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGATACGAGCG > 1:832145/1‑150 AATGCCACGCCCCATAACTCAGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGA < 1:1006205/104‑1 AATGCCACGCCCCATAACTCAGGGGCGTGGCATTGAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGA > 2:1006205/1‑104 CCCATAACTCAGGGGCGTGGC‑‑TCAGCGTAAGTGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGATACGAGCGGGCAGGTCGGGGTTCGGAA > 1:398652/1‑150 TCAGGGGCGTGGC‑‑TCAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGATACGAGCGGGCAGGTCGGGGTTCGCAATGAAGGGG < 1:736777/150‑1 CAGGGGCGTGGC‑‑TCAGCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGATACGAGCGGGCAGGTCGGGGTTCGCAATGAAGGGGC < 2:407592/150‑1 GCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGATACGAGCGGGCAGGTCGGGGTTCGCAATGAAGGGGCGACCAAAAGCGATCA < 2:832145/150‑1 GCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGATACGAGCGGGCAGGTCGGGGTTCGCAATGAAGGGGCGACCAAAAGCGATCA < 2:1216359/150‑1 GCGTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGATACGAGCGGGCAGGTCGGGGTTCGCAATGAAGGGGCGACCAAAAGCGATCA < 1:1098499/150‑1 GTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGATACGAGCGGGCAGGTCGGG < 1:787559/116‑1 GTTTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGATACGAGCGGGCAGGTCGGG > 2:787559/1‑116 TTAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTGATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGGTGTTGGCGATACGAGCGGGCAGGTCGGGTTTCGCAATGCAGGGGCTACCAAAAGCGATCAGGTC < 2:559981/150‑1 CCAACAACTGGCCGCTTAACCCAGTTGATCCAAGCAGCATGTACGGCGGTACCGATAAGGGCTACACCGACTACCCGACTTACAAATCCTAAACGCTCAATGCCACGCCCCATAACTCAGGGGCGTGGC‑‑TCAGCGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2832853‑2832716‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgtttAGGATTTGTAAGTCGGGTAGTCGGTGTAGCCCTTATCGGTACCGCCGTACATGCTGCTTGGATCAACTGGGTTAAGCGGCCAGTTGTTGGCGATACGAGCGGGCAGGTCGGGGTTCGCAATGAAGGGGCGACCAAAAGCGATCAGGTC > NC_002947/2832764‑2832911 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |