| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2894634 | 38 (0.720) | 7 (0.140) | 6/240 | NT | 14.4% | coding (250/1392 nt) | PP_2549 | hypothetical protein |
| ? | NC_002947 | = 2894650 | 46 (0.900) | coding (266/1392 nt) | PP_2549 | hypothetical protein | |||||
CGGCGCTGATGCTCAAGGAAGCGGTACCGGCCCTGGATGTGGTGCTGATCGAGGCCGACATCTGTGGTGCCGGTGCCAGCGGCCGCAATGGGGGCTGTGCGTTGTCCTGGTCGGCCAAGTACTTCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2894506‑2894634‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccCCGAACAGGC‑GTTCGAGGGTGAAGTACTTGGCCGACCAGGACAACGCACAGCCCCCATTGCGGCCGCTGGCACCGGCACCACAGATGTCGGCCTCGATCAGCACCACATCCAGGGCCGGTACCGC < NC_002947/2894650‑2894526 CGGCGCTGATGCTCAAGGAAGCGGTACCGGCCCTGGATGTGGTGCTGATCGAGGCCGACATCTGTGGTGCCGGTGCCAGCGGCCGCAATGGGGGCTGTGCGTTGTCCTGGTCGGCCAAGTACTTCACCCCCGAACAGGC‑GTTCGAGGGTG < 1:1381354/150‑1 GTGCCGGTGCCAGCGGCCGCAATGGGGGCTGTGCGTTGTCCTGGTCGGCCAAGTACTTCACCCTCGAACAGGC‑GTTCGAGG < 1:77936/81‑1 GTGCCGGTGCCAGCGGCCGCAATGGGGGCTGTGCGTTGTCCTGGTCGGCCAAGTACTTCACCCTCGAACAGGC‑GTTCGAGG > 2:77936/1‑81 TCCTGGTCGGCCAAGTACTTCACCCCCGAACAGGC‑GTTCGAGG < 1:927462/43‑1 TCCTGGTCGGCCAAGTACTTCACCCCCGAACAGGC‑GTTCGAGG > 2:927462/1‑43 GGCCAAGTACTTCACCCTCGAACGCCT‑GTTCGGGGGTGAAGTACTTGGCCGACCAGGACAACGCACAGCCCCCATTGCGGCCGCTGGCACCGGCACCACAGATGTCGGCCT < 1:27309/111‑1 GGCCAAGTACTTCACCCTCGAAC‑GCCTGTTCGGGGGTGAAGTACTTGGCCGACCAGGACAACGCACAGCCCCCATTGCGGCCGCTGGCACCGGCACCACAGATGTCGGCCT > 2:27309/1‑111 CCCGAACAGGC‑GTTCGAGGGTGAAGTACTTGGCCGACCAGGACAACGCACAGCCCCCATTGCGGCCGCTGGCACCGGCACCACAGATGTCGGCCTCGATCAGCACCACATCCAGGGCCGGTACCGC < 1:1259274/126‑1 CCCGAACAGGC‑GTTCGAGGGTGAAGTACTTGGCCGACCAGGACAACGCACAGCCCCCATTGCGGCCGCTGGCACCGGCACCACAGATGTCGGCCTCGATCAGCACCACATCCAGGGCCGGTACCGC > 2:1259274/1‑126 CGGCGCTGATGCTCAAGGAAGCGGTACCGGCCCTGGATGTGGTGCTGATCGAGGCCGACATCTGTGGTGCCGGTGCCAGCGGCCGCAATGGGGGCTGTGCGTTGTCCTGGTCGGCCAAGTACTTCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2894506‑2894634‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccCCGAACAGGC‑GTTCGAGGGTGAAGTACTTGGCCGACCAGGACAACGCACAGCCCCCATTGCGGCCGCTGGCACCGGCACCACAGATGTCGGCCTCGATCAGCACCACATCCAGGGCCGGTACCGC < NC_002947/2894650‑2894526 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |