New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2996201	40 (0.760)	5 (0.100)	5/238	NT	12.9%	coding (686/1017 nt)	PP_2620	hypothetical protein
	?	NC_002947	= 2996224	29 (0.570)					coding (663/1017 nt)	PP_2620	hypothetical protein

AGTCCCGCAGCTGCGTCTGGTCGAGTTCGCTGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTC‑CGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2996088‑2996201 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccGTCCAGGCAGCTTGCAAGCCTGGGGCGGACCAACGGCCAGCTGGGCAGCACGTTCATGATTGGCAGCCGCACGCGCACCCGCAGCAGCAAGTTCACCATCGTGATCAGCGAACTCGACCAGACGCAGCTGCGGGACTTGCTGCCCAGCG  <  NC_002947/2996224‑2996076                                                                                                                                                                                                                                                                          AGTCCCGCAGCTGCGTCTGGTCGAGTTCGCTGATCACGATGTTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCACGCCGTCCAGGCAGCTTGCAAGCCTGGGGCGGACCAACG                                                                                                                    <  1:1301884/150‑1                          TTCGCTGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTC‑CGCCGTCCAGGCAGCTTGCAAGCCTGGGGC                                                                                                                             >  1:227230/1‑115                          TTCGCTGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTC‑CGCCGTCCAGGCAGCTTGCAAGCCTGGGGC                                                                                                                             <  2:227230/115‑1                             GCTGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTC‑CGCCGTCCAGGCAGCTTGCAAGCCTGGGGCGGACCAA                                                                                                                      <  1:399864/119‑1                             GCTGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTC‑CGCCGTCCAGGCAGCTTGCAAGCCTGGGGCGGACCAA                                                                                                                      >  2:399864/1‑119                                                                                                                   CGTCCAGGCAGCTTGCAAGCCTGGGGCGGACCAACGGCCAGCTGGGCAGCACGTTCATGATTGGCAGCCGCACGCGCACCCGCAGCAGCAAGTTCACCATCGTGATCAGCGAACTCGACCAGACGCAGCTGCGGGACTTGCTGCCCAGCG  <  2:1398931/150‑1                                                                                                                                                                                                                                                                          AGTCCCGCAGCTGCGTCTGGTCGAGTTCGCTGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTC‑CGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2996088‑2996201 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccGTCCAGGCAGCTTGCAAGCCTGGGGCGGACCAACGGCCAGCTGGGCAGCACGTTCATGATTGGCAGCCGCACGCGCACCCGCAGCAGCAAGTTCACCATCGTGATCAGCGAACTCGACCAGACGCAGCTGCGGGACTTGCTGCCCAGCG  <  NC_002947/2996224‑2996076

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.