New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2996201	40 (0.760)	5 (0.100)	5/238	NT	12.9%	coding (686/1017 nt)	PP_2620	hypothetical protein
	?	NC_002947	= 2996224	29 (0.570)					coding (663/1017 nt)	PP_2620	hypothetical protein

CGCTGGGCAGCAAGTCCCGCAGCTGCGTCTGGTCGAGTTCGCTGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAG  >  NC_002947/2996076‑2996370                                                                                                                                                     |                                                                                                                                                   cGCTGGGCAGCAAGTCCCGCAGCTGCGTCTGGTCGAGTTCGCTGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACg                                                                                                                                                   <  2:1398931‑M2/150‑2 (MQ=255)     gggCAGCAAGTCCCGCAGCTGCGTCTGGTCGAGTTCGCTGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCAAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGt                                                                                                                                               <  2:1035752/150‑1 (MQ=255)        cagcaAGTCCCGCAGCTGCGTCTGGTCGAGTTCGCTGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTgac                                                                                                                                            <  1:1384823/150‑1 (MQ=255)               tCCCGCAGCTGCGTCTGGTCGAGTTCGCTGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGAt                                                                                                                                     >  1:149813/1‑150 (MQ=255)                 ccGCAGCTGCGTCTGGTCGAGTTCGCTGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATcg                                                                                                                                   >  2:213084/1‑150 (MQ=255)                       cTGCGTCTGGTCGAGTTCGCTGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGtctc                                                                                                                             <  2:750428/150‑1 (MQ=255)                            tCTGGTCGAGTTCGCTGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGAACt                                                                                                                        >  1:254507/1‑150 (MQ=255)                                    aGTTCGCTGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGAtg                                                                                                                <  1:512206/150‑1 (MQ=255)                                      ttCGCTGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGACAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCCGCCACAGGCTTGCAAGCTGCCTGGCCGGCGTGACGACTGATCGCGTCTCGAACTCGCGGAtgtg                                                                                                              >  1:239269/1‑150 (MQ=255)                                       tCGCTGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGc                                                                                                             <  2:298252/150‑1 (MQ=255)                                           tGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGaa                                                                                                                          <  1:194712/133‑1 (MQ=255)                                           tGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGaa                                                                                                                          >  2:194712/1‑133 (MQ=255)                                           tGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCt                                                                                                         >  2:847437/1‑150 (MQ=255)                                             aTCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCTAACTCGCGGATGTGCACCTGc                                                                                                       <  2:285986/150‑1 (MQ=255)                                               cgcGATGGTTAACTTGCTGCTCCGGGTGCGCGCGCCTCTCCAACTCAAGAACGTCCACCCCAGCTGACCGTTGTTCCGCCAGAATCATATAATCTACCTGGACGGCATGACTACTGATCGCGTCGCGAACTCGCGGATGTGCACCTGCtt                                                                                                     <  2:239269/148‑1 (MQ=255)                                                                       ggTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCGCCTGCTTGAGGTCGAAGCAGTGCGCAatgat                                                                             <  2:254507/150‑1 (MQ=255)                                                                         tGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAgg                                                                                                 >  1:48445/1‑128 (MQ=255)                                                                         tGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAgg                                                                                                 <  2:48445/128‑1 (MQ=255)                                                                                   gCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTGCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCGACAGt                                                                 >  2:86683/1‑150 (MQ=255)                                                                                      cccAATCATGACTGTGCTTCCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGcc                                                              <  2:1149687/149‑1 (MQ=255)                                                                                       ccAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGccc                                                             <  1:213084/150‑1 (MQ=255)                                                                                              tGAACGTGCTGCCCAGCTGGCGGTTGGGCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTc                                                      >  2:1196659/1‑150 (MQ=255)                                                                                                       tgcCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTcgg                                                    <  1:484366/143‑1 (MQ=255)                                                                                                       tgcCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTcgg                                                    >  2:484366/1‑143 (MQ=255)                                                                                                             gCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGa                                       <  2:100151/150‑1 (MQ=255)                                                                                                                ggCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTATCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGAAGTGCGCAATGATGCCAGCTACAATGCCCGGCGCCCGGCTGCGGCTGCCGATcc                                    >  2:495743/1‑149 (MQ=255)                                                                                                                  ccGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACg                                  <  1:1337754/150‑1 (MQ=255)                                                                                                                   cGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACggcgtgaccaacggccagctgggcagcacgttcatgattggcagccgcacgcgcacccgcagcagcaagttcaacatcgtgatcagcgaactcgaccagacgcagctgcgggact                                 <  1:1301884‑M2/150‑116 (MQ=255)                                                                                                                     ttGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACggcggaccaacggccagctgggcagcacgttcatgattggcagccgcacgcgcacccgcagcagcaagttcaccatcgtgatcagc                                                              <  1:399864‑M2/119‑87 (MQ=255)                                                                                                                     ttGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACggcggaccaacggccagctgggcagcacgttcatgattggcagccgcacgcgcacccgcagcagcaagttcaccatcgtgatcagc                                                              >  2:399864‑M2/1‑33 (MQ=255)                                                                                                                           cGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCaaaa                         >  1:1252048/1‑150 (MQ=255)                                                                                                                            gCCCCAGGCTTGCAAGCTGCCTGGACggcggaccaacggccagctgggcagcacgttcatgattggcagccgcacgcgcacccgcagcagcaagttcaccatcgtgatcagcgaa                                                           >  1:227230‑M2/1‑26 (MQ=255)                                                                                                                            gCCCCAGGCTTGCAAGCTGCCTGGACggcggaccaacggccagctgggcagcacgttcatgattggcagccgcacgcgcacccgcagcagcaagttcaccatcgtgatcagcgaa                                                           <  2:227230‑M2/115‑90 (MQ=255)                                                                                                                              cccAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTg                      >  1:1193197/1‑150 (MQ=255)                                                                                                                               ccAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGa                     >  1:1293089/1‑150 (MQ=255)                                                                                                                                               ccTGGGCGGCGTGATGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAggg     <  2:1012606/150‑1 (MQ=255)                                                                                                                                                cTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGc    >  2:805603/1‑150 (MQ=255)                                                                                                                                                  ggACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAg  >  1:462962/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CGCTGGGCAGCAAGTCCCGCAGCTGCGTCTGGTCGAGTTCGCTGATCACGATGGTGAACTTGCTGCTGCGGGTGCGCGTGCGGCTGCCAATCATGAACGTGCTGCCCAGCTGGCCGTTGGTCCGCCCCAGGCTTGCAAGCTGCCTGGACGGCGTGACGACTGATCGCGTCTCGAACTCGCGGATGTGCACCTGCTTGAGGTCGAAGCAGTGCGCAATGATGCCGGCTACAGTGCCCGGCGCTCGGCTGCGGCTGGCGATCACGCCGGCAAAACTGAGCAGGCGGCTCCAGGGCAG  >  NC_002947/2996076‑2996370

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.