New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3078868 =	49 (0.930)	3 (0.060)	3/226	NT	6.3%	coding (441/1410 nt)	PP_2688	hypothetical protein
	?	NC_002947	3078940 =	44 (0.910)					coding (369/1410 nt)	PP_2688	hypothetical protein

CCTGTTCCTGGAGGACATCTACCACGACCAACGCATTCTCAAGGCCGGCATCATCCCGCCAGAGCAAGTGCTGGCCAACGAGGGCTACCAGATCGCCATGCAGGGCCTGGACCTTCACCGTGGGCTGTATGCGCATATTGCCGGTGTCGATCTGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3079024‑3078868 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatctggtaGCCCTCGTTGGCCAGCACTTGCTCTGGCGGGATGATGCCGGCCTTGAGAATGCGTTGGTCGTGGTAGATGTCCTCCAGGAACAGGTTCAGCGCCTGTACCCGTT  >  NC_002947/3078940‑3079043                                                                                                                                                                                                                                                                       CCTGTTCCTGGAGGACATCTACCACGACCAACGCATTCTCAAGGCCGGCATCATCCCGCCAGAGCAAGTGCTGGCCAACGAGGGCTACCAGATCGCCATGCAGGGCCTGGACCTTCACCGTGGGCTGTATGCGCATATTGCCGGTGTCGA                                                                                                                 >  1:425074/1‑150                                                                                      TACCAGATCGCCATGCAGGGCCTGGACCTTCACCGTGGGCTGTATGCGCATATTGCCGGTGTCGATCTGGTAGCCCTCGTTGGCCAGCACTTGCTCTGGCGGGATGATGCCGGCCTTGAGAATGCG                                                    >  1:1406007/1‑126                                                                                      TACCAGATCGCCATGCAGGGCCTGGACCTTCACCGTGGGCTGTATGCGCATATTGCCGGTGTCGATCTGGTAGCCCTCGTTGGCCAGCACTTGCTCTGGCGGGATGATGCCGGCCTTGAGAATGCG                                                    <  2:1406007/126‑1                                                                                                CCATGCAGGGCCTGGACCTTCACCGTGGGCTGTATGCGCATATTGCCGGTGTCGATCTGGTAGCCCTCGTTGGCCAGCACTTGCTCTGGCGGGATGATGCCGGCCTTGAGAATGCGTTGGTCGTGGTAGATGTCCTCCAGGAACAGGTTC                  >  1:1144657/1‑150                                                                                                                                                           GTAGCCCTCGTTGGCCAGCACTTGCTCTGGCTGGATGATGCCGGCCTTGAGAATGCGTTGGTCGTGGTAGA                                      >  1:902289/1‑71                                                                                                                                                           GTAGCCCTCGTTGGCCAGCACTTGCTCTGGCTGGATGATGCCGGCCTTGAGAATGCGTTGGTCGTGGTAGA                                      <  2:902289/71‑1                                                                                                                                                           GTAGCCCTCGTTGGCCAGCACTTGCTCTGGCGGGATGATGCCGGCCTTGAGAATGCGTTGGTCGTGGTAGATGTCCTCCAGGAACAGGTTCAGCGCCTGTACCCGTT  <  1:1291493/107‑1                                                                                                                                                           GTAGCCCTCGTTGGCCAGCACTTGCTCTGGCGGGATGATGCCGGCCTTGAGAATGCGTTGGTCGTGGTAGATGTCCTCCAGGAACAGGTTCAGCGCCTGTACCCGTT  >  2:1291493/1‑107                                                                                                                                                                                                                                                                       CCTGTTCCTGGAGGACATCTACCACGACCAACGCATTCTCAAGGCCGGCATCATCCCGCCAGAGCAAGTGCTGGCCAACGAGGGCTACCAGATCGCCATGCAGGGCCTGGACCTTCACCGTGGGCTGTATGCGCATATTGCCGGTGTCGATCTGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3079024‑3078868 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatctggtaGCCCTCGTTGGCCAGCACTTGCTCTGGCGGGATGATGCCGGCCTTGAGAATGCGTTGGTCGTGGTAGATGTCCTCCAGGAACAGGTTCAGCGCCTGTACCCGTT  >  NC_002947/3078940‑3079043

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.