| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3581719 | 52 (0.990) | 4 (0.080) | 4/228 | NT | 7.3% | coding (772/942 nt) | PP_3160 | hypothetical protein |
| ? | NC_002947 | = 3581735 | 53 (1.090) | coding (788/942 nt) | PP_3160 | hypothetical protein | |||||
GACAGTACCCTCCCAGCCAGGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3581563‑3581719‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtctcccggGCTGCTTGGGCATCCACCGGGAGACGTTCCTTCTCAAAGTGCTTTACAGCCAGGTTAAAACGATTCGCTCTGCTTTGGAACCAGCCAGCAGCTCGCTTTAGTCGCTGTACGTCATTTGGGTGCCACGATTGGTTTCTTTTGGCGTGT < NC_002947/3581735‑3581589 GACAGTACCCTCCCAGCCAGGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTATTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGT > 2:762683/1‑150 CCCTCCCAGCCAGGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGG < 2:1226382/150‑1 AGACACCAATCGCTGCACCCATATTACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGGCTGCTTGGGCATCCACCGGGAGACGTTC < 2:969427/150‑1 GAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGGCTGCTTGGGCATCCACCGGGAGACGTTCC < 2:1152886/150‑1 GCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGGCTGCTTGGGCATCCACCGGGAGACGTTCCTTC < 1:917115/122‑1 GCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGGCTGCTTGGGCATCCACCGGGAGACGTTCCTTC > 2:917115/1‑122 TCCCGGGCTGCTTGGGCATCCACCGGGAGACGTTCCTTCTCAAAGTGCTTTAC < 1:605320/53‑1 TCCCGGGCTGCTTGGGCATCCACCGGGAGACGTTCCTTCTCAAAGTGCTTTAC > 2:605320/1‑53 CCCGGGCTGCTTGGGCATCCACCGGGAGACGTTCCTTCTCAAAGTGCTTTACAGCCAGGTTAAAACGATTCGCTCTGCTTTGGAACCAGCCAGCAGCTCGCTTTAGTCGCTGTACGTCATTTGGGTGCCACGATTGGTTTCTTTTGGCGT < 2:251339/150‑1 CCGGGCTGCTTGGGCATCCACCGGGAGACGTTCCTTCTCAAAGTGCTTTACAGCCAGGTTAAAACGATTCGCTCTGCTTTGGAACCAGCCAGCAGCTCGCTTTAGTCGCTGTACGTCATTTGGGTGCCACGATTGGTTTCTTTTGGCGTG > 1:553895/1‑150 CGGGCTGCTTGGGCATCCACCGGGAGACGTTCCTTCTCAAAGTGCTTTACAGCCAGGTTAAAACGATTCGCTCTGCTTTGGAACCAGCCAGCAGCTCGCTTTAGTCGCTGTACGTCATTTGGGTGCCACGATTGGTTTCTTTTGGCGTGT < 2:1405426/150‑1 GACAGTACCCTCCCAGCCAGGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3581563‑3581719‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtctcccggGCTGCTTGGGCATCCACCGGGAGACGTTCCTTCTCAAAGTGCTTTACAGCCAGGTTAAAACGATTCGCTCTGCTTTGGAACCAGCCAGCAGCTCGCTTTAGTCGCTGTACGTCATTTGGGTGCCACGATTGGTTTCTTTTGGCGTGT < NC_002947/3581735‑3581589 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |