New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 358171952 (0.990)4 (0.080) 4/228 NT 7.3% coding (772/942 nt) PP_3160 hypothetical protein
?NC_002947 = 3581735 53 (1.090)coding (788/942 nt) PP_3160 hypothetical protein

CCCTCCCAGCCAGGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGAAAAAGTACCG  >  NC_002947/3581570‑3581868
                                                                                                                                                     |                                                                                                                                                     
cccTCCCAGCCAGGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGG                                                                                                                                                       <  2:1226382‑M1/150‑1 (MQ=255)
   tCCCAGCCAGGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTgg                                                                                                                                                    >  1:843505/1‑150 (MQ=255)
    cccAGCCAGGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGa                                                                                                                                                   <  2:95377/150‑1 (MQ=255)
          cagGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCa                                                                                                                                             >  2:237202/1‑150 (MQ=255)
           agGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCaa                                                                                                                                            >  1:1351460/1‑150 (MQ=255)
                   acacGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCccg                                                                                                                                    <  2:1405426‑M2/150‑4 (MQ=255)
                    cacGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCccgg                                                                                                                                   >  1:553895‑M2/1‑146 (MQ=255)
                     acGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCccggg                                                                                                                                  <  2:251339‑M2/150‑6 (MQ=255)
                         cAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGc                                                                                                                                                <  1:483698/132‑1 (MQ=255)
                         cAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGc                                                                                                                                                >  2:483698/1‑132 (MQ=255)
                             aGACACCAATCGCTGCACCCATATTACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGgctgcttgggcatccaccgggagacgttc                                                                                                                          <  2:969427‑M1/150‑30 (MQ=255)
                              gAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGgctgcttgggcatccaccgggagacgttcc                                                                                                                         <  2:1152886‑M1/150‑31 (MQ=255)
                               aaaCCAATCGTGGCACCCAAATGACCTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACTTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATAGCa                                                                                                                        <  2:494335/150‑1 (MQ=255)
                                    aaTCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCaggagg                                                                                                                   <  1:1017843/150‑1 (MQ=255)
                                     aTCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGAt                                                                                                                                                  >  2:1194546/1‑118 (MQ=255)
                                     aTCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGAt                                                                                                                                                  <  1:1194546/118‑1 (MQ=255)
                                          ggCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTaa                                                                                                             <  1:237202/150‑1 (MQ=255)
                                          ggCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTaa                                                                                                             <  1:1073118/150‑1 (MQ=255)
                                          ggCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTATGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTaa                                                                                                             <  1:933103/150‑1 (MQ=255)
                                             aCCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAACACACTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTa                                                                                                          >  2:405448/1‑150 (MQ=255)
                                                       cGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATg                                                                                                <  2:490119/150‑1 (MQ=255)
                                                             gCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGgctgcttgggcatccaccgggagacgttccttc                                                                                                                      <  1:917115‑M1/122‑34 (MQ=255)
                                                             gCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGgctgcttgggcatccaccgggagacgttccttc                                                                                                                      >  2:917115‑M1/1‑89 (MQ=255)
                                                              cGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGAt                                                                                         <  2:48589/150‑1 (MQ=255)
                                                                  tAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGac                                                                                     >  2:130665/1‑150 (MQ=255)
                                                                    aaGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGacac                                                                                   >  1:232715/1‑150 (MQ=255)
                                                                          gctgctGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTa                                                                             <  2:843505/150‑1 (MQ=255)
                                                                            tgctgGTTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAATCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGc                                                                           >  1:638168/1‑150 (MQ=255)
                                                                              ctggctggTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTg                                                                         >  1:1051272/1‑150 (MQ=255)
                                                                                   tggTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCaaaa                                                                    <  1:1405426/150‑1 (MQ=255)
                                                                                         cAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATc                                                                                                        <  1:972468/108‑1 (MQ=255)
                                                                                         cAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATc                                                                                                        >  2:972468/1‑108 (MQ=255)
                                                                                         cAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGAttt                                                              >  1:488987/1‑150 (MQ=255)
                                                                                          aaaGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAgg                                                                  >  1:1330060/1‑145 (MQ=255)
                                                                                          aaaGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAgg                                                                  <  2:1330060/145‑1 (MQ=255)
                                                                                          aaaGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGAtttt                                                             <  1:251339/150‑1 (MQ=255)
                                                                                                     aaTCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGt                                                  >  2:763356/1‑150 (MQ=255)
                                                                                                       tCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGa                                                <  2:1351460/150‑1 (MQ=255)
                                                                                                          ttttAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATgg                                                                                               >  2:614818/1‑100 (MQ=255)
                                                                                                          ttttAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATgg                                                                                               <  1:614818/100‑1 (MQ=255)
                                                                                                          ttttAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGtt                                                                                            >  2:605504/1‑103 (MQ=255)
                                                                                                          ttttAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGtt                                                                                            <  1:605504/103‑1 (MQ=255)
                                                                                                          ttttAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGt                                                                                             <  2:167367/102‑1 (MQ=255)
                                                                                                          ttttAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGt                                                                                             >  1:167367/1‑102 (MQ=255)
                                                                                                              aaCCTCGCTGGAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTc                                         <  1:853258/150‑1 (MQ=255)
                                                                                                                 cTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGaa                                      <  2:232715/150‑1 (MQ=255)
                                                                                                                       gTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCccggga                                                                                                                                 <  1:605320‑M2/53‑7 (MQ=255)
                                                                                                                       gTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCccggga                                                                                                                                 >  2:605320‑M2/1‑47 (MQ=255)
                                                                                                                       gTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATc                                                                                        >  1:1015274/1‑94 (MQ=255)
                                                                                                                       gTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATc                                                                                        <  2:1015274/94‑1 (MQ=255)
                                                                                                                          aaGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAg                                                                                                            <  1:1111081/71‑1 (MQ=255)
                                                                                                                          aaGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAg                                                                                                            >  2:1111081/1‑71 (MQ=255)
                                                                                                                            gCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAgttgtt                                          >  1:592266/1‑135 (MQ=255)
                                                                                                                            gCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAgttgtt                                          <  2:592266/135‑1 (MQ=255)
                                                                                                                               cTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTc                        <  1:763356/150‑1 (MQ=255)
                                                                                                                               cTTTAAGAAGTAACGTCTCCCGGTGGATGCCCAAGCGTCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTc                        >  2:415169/1‑150 (MQ=255)
                                                                                                                                tttGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCaaaa                                                                    <  2:204568/105‑1 (MQ=255)
                                                                                                                                tttGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCaaaa                                                                    >  1:204568/1‑105 (MQ=255)
                                                                                                                                tttGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGc                                                    >  2:419063/1‑121 (MQ=255)
                                                                                                                                tttGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGc                                                    <  1:419063/121‑1 (MQ=255)
                                                                                                                                tttGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACAACTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCt                       >  1:729463/1‑150 (MQ=255)
                                                                                                                                   gagaAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGaa                    <  1:130665/150‑1 (MQ=255)
                                                                                                                                   gagaAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGaa                    <  1:762683/150‑1 (MQ=255)
                                                                                                                                     gaAGGAACGTCTCCCGGTGGATGCCCAAGCAGCccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagcagctcgctttagtcgc                                              <  1:917115‑M2/122‑90 (MQ=255)
                                                                                                                                     gaAGGAACGTCTCCCGGTGGATGCCCAAGCAGCccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagcagctcgctttagtcgc                                              >  2:917115‑M2/1‑33 (MQ=255)
                                                                                                                                        ggAACGTCTCCCGGTGGATGCCCAAGCAGCccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagcagctcgctttagtcgctgtacgtcatttgggtgccacgattggtttc               <  2:1152886‑M2/150‑121 (MQ=255)
                                                                                                                                        ggAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTAc               <  2:1051272/150‑1 (MQ=255)
                                                                                                                                         gAACGTCTCCCGGTGGATGCCCAAGCAGCccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagcagctcgctttagtcgctgtacgtaatatgggtgcagcgattggtgtct              <  2:969427‑M2/150‑122 (MQ=255)
                                                                                                                                         gAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTAcc              <  2:488987/150‑1 (MQ=255)
                                                                                                                                                tcCCGGgctgcttgggcatccaccgggagacgttccttctcaaagtgctttac                                                                                                        >  2:605320‑M1/1‑6 (MQ=255)
                                                                                                                                                tcCCGGgctgcttgggcatccaccgggagacgttccttctcaaagtgctttac                                                                                                        <  1:605320‑M1/53‑48 (MQ=255)
                                                                                                                                                tcCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACCCATGGTCGCGAAAAAAGGGGTGTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGAAAAAg       >  1:1390747/1‑150 (MQ=255)
                                                                                                                                                 cccGGgctgcttgggcatccaccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagcagctcgctttagtcgctgtacgtcatttgggtgccacgattggtttcttttggcgt      <  2:251339‑M1/150‑146 (MQ=255)
                                                                                                                                                  ccGGgctgcttgggcatccaccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagcagctcgctttagtcgctgtacgtcatttgggtgccacgattggtttcttttggcgtg     >  1:553895‑M1/1‑4 (MQ=255)
                                                                                                                                                   cGGgctgcttgggcatccaccgggagacgttccttctcaaagtgctttacagccaggttaaaacgattcgctctgctttggaaccagccagcagctcgctttagtcgctgtacgtcatttgggtgccacgattggtttcttttggcgtgt    <  2:1405426‑M1/150‑148 (MQ=255)
                                                                                                                                                     gTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGAAAAAGTACCg  >  2:459271/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CCCTCCCAGCCAGGATAAAACACGCCAAAAGAAACCAATCGTGGCACCCAAATGACGTACAGCGACTAAAGCGAGCTGCTGGCTGGTTCCAAAGCAGAGCGAATCGTTTTAACCTGGCTGTAAAGCACTTTGAGAAGGAACGTCTCCCGGTGGATGCCCAAGCAGCCCGGGAGACATTGCAGGAGGTGTTAAGTATCAAACAATGGGTTGATCGACACCTGGTAGCTGCAAAAGGATTTTTAGAAAAGCGTGAGTTGTTCGAAGCATTGCCATTTTCTGAAGTTACCGAAAAAGTACCG  >  NC_002947/3581570‑3581868

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.