New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3755057	41 (0.780)	5 (0.100)	4/232	NT	12.4%	coding (455/2202 nt)	PP_3319	GGDEF domain‑containing sensory box protein
	?	NC_002947	= 3755090	32 (0.650)					coding (488/2202 nt)	PP_3319	GGDEF domain‑containing sensory box protein

GTGACAGCGGATATAGCCCGGGATCCGAGCTGGGAGCGTTTTCGCAGTCTGGCGCTAGGGTACAATCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3754903‑3755057 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcgccGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAATCGCTTGATCCTGGTATAGCGCAAATGTCCCAAGAACGGAGCCCTCATGCGAGAGTAATGGCAACGACCAGCAGGAGCGTAGATTGTACCCTAGCGCCAGACTGCG  <  NC_002947/3755090‑3754945                                                                                                                                                                                                                                                                                                               GTGACAGCGGATATAGCCCGGGATCCGAGCTGGGAGCGTTTTCGCAGTCTGGCGCTAGGGTACAATCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATT                                                                                                                                                         <  2:674173/150‑1                           GAGCTGGGAGCGTTTTCGCAGTCTGGCGCTAGGGTACAATCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCGCGCAGGTCAGCCGATGGATC                                                                                                                               >  1:1306124/1‑150                                          TCGCAGTCTGGCGCTAGGGTACAATCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGC                                                                                                                <  1:1176240/150‑1                                          TCGCAGTCTGGCGCTAGGGTACAATCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGC                                                                                                                <  2:1306124/150‑1                                                             TACAATCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTG                                                                                                                  <  1:1238327/129‑1                                                             TACAATCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTG                                                                                                                  >  2:1238327/1‑129                                                                                                                                                        CGCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAATCGCTTGATCCTGGTATAGCGCAAATGTCCCAAGAACGGAGCCCTCATGCGAGAGTAATGGCAACGACCAGCAGGAGCGTAGATTGTACCCTAGCGCCAGACTGCG  >  2:208830/1‑150                                                                                                                                                         GCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAATCGCTTGATCCTGGTATAGCGCAAATGTCCCAAGAACGGAGCCCTCATGCGAGAGT                                                    >  1:414915/1‑99                                                                                                                                                         GCCGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAATCGCTTGATCCTGGTATAGCGCAAATGTCCCAAGAACGGAGCCCTCATGCGAGAGT                                                    <  2:414915/99‑1                                                                                                                                                                                                                                                                                                               GTGACAGCGGATATAGCCCGGGATCCGAGCTGGGAGCGTTTTCGCAGTCTGGCGCTAGGGTACAATCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3754903‑3755057 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcgccGCGCAGGTCAGCCGATGGATCTGCACCTCGCTTGGCGCAATCGCTTGATCCTGGTATAGCGCAAATGTCCCAAGAACGGAGCCCTCATGCGAGAGTAATGGCAACGACCAGCAGGAGCGTAGATTGTACCCTAGCGCCAGACTGCG  <  NC_002947/3755090‑3754945

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.