| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3755057 | 41 (0.780) | 5 (0.100) | 4/232 | NT | 12.4% | coding (455/2202 nt) | PP_3319 | GGDEF domain‑containing sensory box protein |
| ? | NC_002947 | = 3755090 | 32 (0.650) | coding (488/2202 nt) | PP_3319 | GGDEF domain‑containing sensory box protein | |||||
TTTTCGCAGTCTGGCGCTAGGGTACAATCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCATTGTTTACCTACAACCCCAACCCGGTTTTCGCCCTTGACAGGGCGGGCAA > NC_002947/3754941‑3755219 | ttttCGCAGTCTGGCGCTAGGGTACAATCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTgcgc > 1:432783/1‑150 (MQ=255) cGCAGTCTGGCGCTAGGGTACAATCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCggcg > 2:208830‑M2/1‑146 (MQ=255) gggTACAATCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCAtt < 2:432783/150‑1 (MQ=255) aaTCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATc > 2:378315/1‑150 (MQ=255) tCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATACATCGGCTGACCGGCTCGGTGCAAGTGGCTGCCATTGCGATCCg > 2:308538/1‑150 (MQ=255) caCGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAAAGCCCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGc < 1:785250/149‑1 (MQ=255) gCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATg > 2:1322061/1‑150 (MQ=255) cTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGa < 1:1035933/150‑1 (MQ=255) ccTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGc < 2:1023994/150‑1 (MQ=255) gTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCa > 2:128964/1‑150 (MQ=255) ttGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCaa > 1:813059/1‑150 (MQ=255) aCTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCggc < 2:414915‑M2/99‑4 (MQ=255) aCTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCggc > 1:414915‑M2/1‑96 (MQ=255) aTGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCg > 1:1154786/1‑150 (MQ=255) gAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGaa < 2:1154786/150‑1 (MQ=255) tCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACgg < 1:842539/150‑1 (MQ=255) ggACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCAtt < 2:1270483/89‑1 (MQ=255) ggACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCAtt > 1:1270483/1‑89 (MQ=255) ggACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCAt > 2:710125/1‑150 (MQ=255) gACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCAtt < 1:128964/150‑1 (MQ=255) aCATTTGCGCTATACCAGGATCAAGCGATTGCGAAAAGCGGGGTGCAGATCCATCGTTTTTCCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCATTg < 1:234694/150‑1 (MQ=255) tGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCATTGTTTAc < 2:813059/150‑1 (MQ=255) tGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCATTGTTTAc < 1:308538/150‑1 (MQ=255) tGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCATTGTTTAc < 1:1322061/150‑1 (MQ=255) cgcTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCATTGTTTACCt > 2:38551/1‑150 (MQ=255) cAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCAtt > 1:832051/1‑134 (MQ=255) cAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCAtt < 2:832051/134‑1 (MQ=255) cAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCATTGTTTACCTAcaacccc < 1:38551/150‑1 (MQ=255) gATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACg < 1:13691/119‑1 (MQ=255) gATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACg > 2:13691/1‑119 (MQ=255) aaGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGaa < 2:1367544/110‑1 (MQ=255) aaGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGaa > 1:1367544/1‑110 (MQ=255) aGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTc < 2:848110/119‑1 (MQ=255) aGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTc > 1:848110/1‑119 (MQ=255) gCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGc < 1:778379/59‑1 (MQ=255) gCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGc > 2:778379/1‑59 (MQ=255) gcCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCggcgcaatcgcttgatcctggtatagcgcaaatgtcccaagaacggagccctcatgcgagagtaatggcaacgaccagcaggagcgtagattgtaccctagcgccagactgcga < 2:1306124‑M2/150‑115 (MQ=255) gcCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCggcgcaatcgcttgatcctggtatagcgcaaatgtcccaagaacggagccctcatgcgagagtaatggcaacgaccagcaggagcgtagattgtaccctagcgccagactgcga < 1:1176240‑M2/150‑115 (MQ=255) cAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCggcgcaatcgcttgatcctggtatagcgcaaatgtcccaagaacggagccctcatgcgagagtaatggcaacgaccagcaggagcgtagattgta > 2:1238327‑M2/1‑34 (MQ=255) cAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCggcgcaatcgcttgatcctggtatagcgcaaatgtcccaagaacggagccctcatgcgagagtaatggcaacgaccagcaggagcgtagattgta < 1:1238327‑M2/129‑96 (MQ=255) gATCCATCGGCTGACCTGCGCggcgcaatcgcttgatcctggtatagcgcaaatgtcccaagaacggagccctcatgcgagagtaatggcaacgaccagcaggagcgtagattgtaccctagcgccagactgcgaaaacgctcccagctc > 1:1306124‑M2/1‑21 (MQ=255) | TTTTCGCAGTCTGGCGCTAGGGTACAATCTACGCTCCTGCTGGTCGTTGCCATTACTCTCGCATGAGGGCTCCGTTCTTGGGACATTTGCGCTATACCAGGATCAAGCGATTGCGCCAAGCGAGGTGCAGATCCATCGGCTGACCTGCGCGGCGCAACTGGCTGCCATTGCGATCCGGCATGAGCGTGACGGCCAACGTCTGGAGGAAAGCGAACAACGGTTTCGCTCATTGTTTACCTACAACCCCAACCCGGTTTTCGCCCTTGACAGGGCGGGCAA > NC_002947/3754941‑3755219 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |