| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4160896 | 46 (0.880) | 10 (0.200) | 8/232 | NT | 19.3% | coding (1205/1302 nt) | PP_3663 | GGDEF domain‑containing protein |
| ? | NC_002947 | = 4160919 | 40 (0.810) | coding (1182/1302 nt) | PP_3663 | GGDEF domain‑containing protein | |||||
TGTACGGATCACCCACATGGGTTACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4160745‑4160896‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatca‑‑GCCGCCGGCGAGCCTGGCGGCGTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCTT < NC_002947/4160919‑4160774 TGTACGGATCACCCACATGGGTTACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGAT > 2:166359/1‑150TGTACGGATCACCCACATGGGTTACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACACCACATCCCCCTGCTCGAT > 2:934213/1‑150 CACATGGGTTACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCA‑‑GCCGCCGGCGA > 2:594971/1‑150 TTACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTC > 1:1165973/1‑126 TTACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTC < 2:1165973/126‑1 CCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCA‑‑GCCGCCGGCGAGCCTGGCGGCGTTGATCGAGC < 1:594971/150‑1 CGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGTTCGATCA‑‑GCCGCCGGCGAGC < 2:972140/104‑1 CGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGTTCGATCA‑‑GCCGCCGGCGAGC > 1:972140/1‑104 CGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCGGCGAGCCTGGCGGCGT > 1:664144/1‑116 CGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCGGCGAGCCTGGCGGCGT < 2:664144/116‑1 AACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCA‑‑GCCGCCGGCGAGCCTGGCGGCGTTGAT > 1:74201/1‑110 AACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCA‑‑GCCGCCGGCGAGCCTGGCGGCGTTGAT < 2:74201/110‑1 CACATCCCCCTGCTCGATCA‑‑GCCGCCGGCGAGCCTGGCGGCGTTGAT > 1:445660/1‑47 CACATCCCCCTGCTCGATCA‑‑GCCGCCGGCGAGCCTGGCGGCGTTGAT < 2:445660/47‑1 GATCA‑‑GCCGCCGGCGAGCCTGGCGGCGTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCAC > 2:1269296/1‑135 GATCA‑‑GCCGCCGGCGAGCCTGGCGGCGTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCAC < 1:1269296/135‑1 ATCA‑‑GCCGCCGGCGAGCCTGGCGGCGTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCTT < 1:1274646/150‑1 A‑‑GCCGCCGGCGAGCCTGGCGGCGTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAG > 2:19499/1‑95 A‑‑GCCGCCGGCGAGCCTGGCGGCGTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAG < 1:19499/95‑1 TGTACGGATCACCCACATGGGTTACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4160745‑4160896‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatca‑‑GCCGCCGGCGAGCCTGGCGGCGTTGATCGAGCAGGGGGATGTGGCGTTGTACCAGTCCAAACGTGGGGGGCGCGACAGCATTCGGTTTTTCGAGCGGGCGGTGGTTGAACTCCGGCAGTGAGCGAGTCACCTAGGTGGGGGAGCTT < NC_002947/4160919‑4160774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |