New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4160896	46 (0.880)	10 (0.200)	8/232	NT	19.3%	coding (1205/1302 nt)	PP_3663	GGDEF domain‑containing protein
	?	NC_002947	= 4160919	40 (0.810)					coding (1182/1302 nt)	PP_3663	GGDEF domain‑containing protein

ACGGATCACCCACATGGGTTACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCTTGTCGGCGTACTGCTGGAACTGCTCACGCAGCCCACTCCCCAGTTCCATGACCCGTTCACTGCTC  >  NC_002947/4160748‑4161042                                                                                                                                                     |                                                                                                                                                   aCGGATCACCCACATGGGTTACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCaa                                                                                                                                                   >  1:119669/1‑150 (MQ=255)     aTCACCAACATGGGTTACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAAcgcc                                                                                                                                               >  1:325851/1‑150 (MQ=255)           cacaTGGGTTACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAgccgccggcga                                                                                                                                         >  2:594971‑M1/1‑139 (MQ=255)                   ttACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCcgg                                                                                                                                 >  2:76165/1‑150 (MQ=255)                    tACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCcggc                                                                                                                                <  1:452672/150‑1 (MQ=255)                     aCATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCcggcg                                                                                                                               <  1:256832/150‑1 (MQ=255)                       aTGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCggcggc                                                                                                                             >  2:40646/1‑150 (MQ=255)                       aTGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCggcggc                                                                                                                             >  2:813432/1‑150 (MQ=255)                       aTGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCggcggc                                                                                                                             >  1:948448/1‑150 (MQ=255)                           aaGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCtgat                                                                                                                         <  1:1274646‑M2/150‑5 (MQ=255)                                cccccACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAgccgccggcgagcctggcggcgttgatcgagc                                                                                                                    <  1:594971‑M1/150‑33 (MQ=255)                                 ccccACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCcggc                                                                                                                                >  1:176163/1‑137 (MQ=255)                                 ccccACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCcggc                                                                                                                                <  2:176163/137‑1 (MQ=255)                                 ccccACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAaca                                                                                                                   >  1:828297/1‑150 (MQ=255)                                  cccACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTCTGGACTGGTACAACGCCACATCCCCCTGCTCGATCACCTCCGCCAGGCTCGCCGGCGGCTGATCGAacac                                                                                                                  <  1:1112784/150‑1 (MQ=255)                                       cTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTgg                                                                                                             >  1:301324/1‑150 (MQ=255)                                         aGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGaa                                                                                                                     <  2:1174302/140‑1 (MQ=255)                                         aGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGaa                                                                                                                     >  1:1174302/1‑140 (MQ=255)                                         aGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCa                                                                                                           <  2:325851/150‑1 (MQ=255)                                           gTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCtgatc                                                                                                                        <  1:1269296‑M2/135‑6 (MQ=255)                                           gTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCtgatc                                                                                                                        >  2:1269296‑M2/1‑130 (MQ=255)                                              aCTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAAt                                                                                                      <  2:499380/150‑1 (MQ=255)                                                tCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGc                                                                                                    >  1:287435/1‑150 (MQ=255)                                                     cACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAg                                                                                               <  2:948448/150‑1 (MQ=255)                                                      aCTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAgg                                                                                              >  2:378093/1‑150 (MQ=255)                                                           cGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGTTCGATCAgccgccggcgagc                                                                                                                                       <  2:972140‑M1/104‑14 (MQ=255)                                                           cGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGTTCGATCAgccgccggcgagc                                                                                                                                       >  1:972140‑M1/1‑91 (MQ=255)                                                           cGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAacgccgccggcgagcctggcggcgt                                                                                                                           >  1:664144‑M1/1‑91 (MQ=255)                                                           cGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAacgccgccggcgagcctggcggcgt                                                                                                                           <  2:664144‑M1/116‑26 (MQ=255)                                                                ttCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTg                                                                                    >  2:1044724/1‑150 (MQ=255)                                                                  cAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTggg                                                                                  <  1:166359/150‑1 (MQ=255)                                                                   aaCCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAgccgccggcgagcctggcggcgttgat                                                                                                                         >  1:74201‑M1/1‑83 (MQ=255)                                                                   aaCCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAgccgccggcgagcctggcggcgttgat                                                                                                                         <  2:74201‑M1/110‑28 (MQ=255)                                                                       accGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTa                                                                             <  2:564209/150‑1 (MQ=255)                                                                         cgcccgcTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAgg                                                                           <  2:119669/150‑1 (MQ=255)                                                                             cgcTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTAACACGCTACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGcaca                                                                       <  2:38206/150‑1 (MQ=255)                                                                               cTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCt                                                                                                                            >  2:19499‑M2/1‑94 (MQ=255)                                                                               cTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCt                                                                                                                            <  1:19499‑M2/95‑2 (MQ=255)                                                                                tCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTc                                                                    <  2:1274646/150‑1 (MQ=255)                                                                                  gAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCtt                                                                  <  1:378093/150‑1 (MQ=255)                                                                                     aaaCCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCTTGTc                                                               <  1:813432/150‑1 (MQ=255)                                                                                        ccGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCTTGTCGGc                                                            >  2:580484/1‑150 (MQ=255)                                                                                        ccGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCTTGTCGGc                                                            >  2:1003516/1‑150 (MQ=255)                                                                                          gAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTg                                                                                    <  2:145863/124‑1 (MQ=255)                                                                                          gAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTg                                                                                    >  1:145863/1‑124 (MQ=255)                                                                                               cTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCTTGTCGGCGTActgc                                                     <  2:287435/150‑1 (MQ=255)                                                                                               cTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCTTGTCGGCGTActgc                                                     >  1:71269/1‑150 (MQ=255)                                                                                                 gTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCTTGTCGGCGTActgctg                                                   <  1:934213/150‑1 (MQ=255)                                                                                                  tCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCTTGTCGGCGTACTGCTgg                                                  <  1:1044724/150‑1 (MQ=255)                                                                                                      gcCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGt                                                                     >  1:234006/1‑127 (MQ=255)                                                                                                      gcCCCCAACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGt                                                                     <  2:234006/127‑1 (MQ=255)                                                                                                                  tGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCTTGTCGGCGTACTGCTGGAACTGCTCACGCAGcc                                  <  1:1003516/150‑1 (MQ=255)                                                                                                                  tGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCTTGTCGGCGTACTGCTGGAACTGCTCACGCAGcc                                  <  1:40646/150‑1 (MQ=255)                                                                                                                       tGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCTTGTCGGCGTACTGCTGGAACTGCTCACGCAGCCCACTc                             <  2:71269/150‑1 (MQ=255)                                                                                                                         gTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCTTGTCGGCGTACTGCTGGAACTGCTCACGCAGCCCACTccc                           >  1:1140020/1‑150 (MQ=255)                                                                                                                            cAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCTTGTCGGCGTACTGCTGGAACTGCTCACGCAGCCCACTCCCCAg                        >  1:914426/1‑150 (MQ=255)                                                                                                                             aaCGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCTTGTCGGCGTACTGCTGGAACTGCTCACGCAGCCCACTCCCCAGt                       >  2:432692/1‑150 (MQ=255)                                                                                                                             aaCGCCACACCCCCCTGCTCGACCAAAGCCGCCAGGCTCGCCGGCGGCTGATCGATTACGTGGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCTTGTCGGCGTACTGCTGGAACTGCTCACGCAGCCCACTCCCCAGt                       >  2:15429/1‑150 (MQ=255)                                                                                                                                  cacaTCCCCCTGCTCGATCAgccgccggcgagcctggcggcgttgat                                                                                                                         <  2:445660‑M1/47‑28 (MQ=255)                                                                                                                                  cacaTCCCCCTGCTCGATCAgccgccggcgagcctggcggcgttgat                                                                                                                         >  1:445660‑M1/1‑20 (MQ=255)                                                                                                                                  cacaTCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCTTGTCGGCGTACTGCTGGAACTGCTCACGCAGCCCACTCCCCAGTTCCAt                  <  2:828297/150‑1 (MQ=255)                                                                                                                                         cccTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCaa                                                                                                >  2:1234296/1‑65 (MQ=255)                                                                                                                                         cccTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCaa                                                                                                <  1:1234296/65‑1 (MQ=255)                                                                                                                                             gCTCGATCAACGCCGCCAGGCTCGCCGGCGGCtgatcgagcagggggatgtggcgttgtaccagtccaaacgtggggggcgcgacagcattcggtttttcgagcgggcggtggttgaactccggcagtgagcgagtcacctaggtggggg       <  1:594971‑M2/150‑119 (MQ=255)                                                                                                                                                 gATCAgccgccggcgagcctggcggcgttgatcgagcagggggatgtggcgttgtaccagtccaaacgtggggggcgcgacagcattcggtttttcgagcgggcggtggttgaactccggcagtgagcgagtcac                  >  2:1269296‑M1/1‑5 (MQ=255)                                                                                                                                                 gATCAgccgccggcgagcctggcggcgttgatcgagcagggggatgtggcgttgtaccagtccaaacgtggggggcgcgacagcattcggtttttcgagcgggcggtggttgaactccggcagtgagcgagtcac                  <  1:1269296‑M1/135‑131 (MQ=255)                                                                                                                                                 gATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCTTGTCGGCGTACTGCTGGAACTGCTCACGCAGCCCACTCCCCAGTTCCATGACCCGTTCACTGCt   >  2:335011/1‑150 (MQ=255)                                                                                                                                                  aTCAgccgccggcgagcctggcggcgttgatcgagcagggggatgtggcgttgtaccagtccaaacgtggggggcgcgacagcattcggtttttcgagcgggcggtggttgaactccggcagtgagcgagtcacctaggtgggggagctt  <  1:1274646‑M1/150‑147 (MQ=255)                                                                                                                                                  aTCAACGCCGCCAGGCTCGCCGGCGGCtgatcgagcagggggatgtggcgttgtaccagtccaaacgtggggggcgcgacagcattcggtttttcgagcgggcggtggtt                                          >  1:74201‑M2/1‑27 (MQ=255)                                                                                                                                                  aTCAACGCCGCCAGGCTCGCCGGCGGCtgatcgagcagggggatgtggcgttgtaccagtccaaacgtggggggcgcgacagcattcggtttttcgagcgggcggtggtt                                          <  2:74201‑M2/110‑84 (MQ=255)                                                                                                                                                  aTCAACGCCGCCAGGCTCGCCGGCGGCtgatcgagcagggggatgtg                                                                                                         >  1:445660‑M2/1‑27 (MQ=255)                                                                                                                                                  aTCAACGCCGCCAGGCTCGCCGGCGGCtgatcgagcagggggatgtg                                                                                                         <  2:445660‑M2/47‑21 (MQ=255)                                                                                                                                                  aTCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCTTGTCGGCGTACTGCTGGAACTGTTCACGCAGCTCACCCCCCTCTACCGTGACCCGTTcgccgatc  >  2:261291/1‑143 (MQ=255)                                                                                                                                                  aTCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCTTGTCGGCGTACTGCTGGAACTGCTCACGCAGCCCACTCCCCAGTTCCATGACCCGTTCACTGCTc  <  2:914426/150‑1 (MQ=255)                                                                                                                                                     agccgccggcgagcctggcggcgttgatcgagcagggggatgtggcgttgtaccagtccaaacgtggggggcgcgacagcattcggtttttcgag                                                      >  2:19499‑M1/1‑1 (MQ=255)                                                                                                                                                     agccgccggcgagcctggcggcgttgatcgagcagggggatgtggcgttgtaccagtccaaacgtggggggcgcgacagcattcggtttttcgag                                                      <  1:19499‑M1/95‑95 (MQ=255)                                                                                                                                                     |                                                                                                                                                   ACGGATCACCCACATGGGTTACATGAAAGCTCCCCCACCTAGGTGACTCGCTCACTGCCGGAGTTCAACCACCGCCCGCTCGAAAAACCGAATGCTGTCGCGCCCCCCACGTTTGGACTGGTACAACGCCACATCCCCCTGCTCGATCAACGCCGCCAGGCTCGCCGGCGGCTGATCGAACACGTTGGCACCAATGCTCAAGGTAACCGCCTGGGGCGTAGGCACAGTCTTGTCGGCGTACTGCTGGAACTGCTCACGCAGCCCACTCCCCAGTTCCATGACCCGTTCACTGCTC  >  NC_002947/4160748‑4161042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.