New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4247709	35 (0.670)	3 (0.060)	3/232	NT	8.6%	coding (252/1608 nt)	aruI	2‑ketoarginine decarboxylase AruI
	?	NC_002947	= 4247747	31 (0.630)					coding (214/1608 nt)	aruI	2‑ketoarginine decarboxylase AruI

GCCACCGCAGAAAACGCCGTGATGGGCGCAGTCATGGCGCGCTGGTCCTGGGTTTCATGCAGGCAGCCCCAGCCCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATGGGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4247554‑4247709 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggggtgTGCTTCGTCATCACCGGCCCAGGCGTGACCAACGTCGCCACCCCCATCGGCCAAGCCTATGCCGACTCGGTGCCGATGCTGGTGATTTCCAGCGTCAACCACACCGCCAGCCTGGGCAAGGGCTGGGGCTGCCTGCATGAAACCCAGGA  <  NC_002947/4247747‑4247599                                                                                                                                                                                                                                                                                                                   GCCACCGCAGAAAACGCCGTGATGGGCGCAGTCATGGCGCGCTGGTCCTGGGTTTCATGCAGGCAGCCCCAGCCCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATG                                                                                                                                                             <  2:779083/150‑1  CCACCGCAGAAAACGCCGTGATGGGCGCAGTCATGGCGCGCTGGTCCTGGGTTTCATGCAGGCAGCCCCAGCCCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATGG                                                                                                                                                            >  1:980005/1‑150    ACCGCAGAAACCGCCGTGATGGGCGCAGTCATGGCGCGCTGGTCCTGGGTTTCATGCAGGCAGCCCCAGCCCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATGGGG                                                                                                                                                          <  1:606612/150‑1                  CGTGATGGGCGCAGTCATGGCGCGCTGGTCCTGGGTTTCATGCAGGCAGCCCCAGCCCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATG                                                                                                                                                             >  1:1254526/1‑133                  CGTGATGGGCGCAGTCATGGCGCGCTGGTCCTGGGTTTCATGCAGGCAGCCCCAGCCCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATG                                                                                                                                                             <  2:1254526/133‑1                      ATGGGCGCAGTCATGGCGCGCTGGTCCTGGGTTTCATGCAGGCAGCCCCAGCCCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATG                                                                                                                                                             <  1:1079007/129‑1                      ATGGGCGCAGTCATGGCGCGCTGGTCCTGGGTTTCATGCAGGCAGCCCCAGCCCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATG                                                                                                                                                             >  2:1079007/1‑129                                              TCCTGGGTTTCATGCAGGCAGCCCCAGCCCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATGGG                                                                                                                                                           >  1:115784/1‑107                                              TCCTGGGTTTCATGCAGGCAGCCCCAGCCCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATGGG                                                                                                                                                           <  2:115784/107‑1                                                     TTTCATGCAGGCAGCCCCAGCCCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTAGCCGATGGGGGTGTGCTTCGTCATCACCGGCCTAGGCGTGACCAACGTCGCCACCC                                                                                                            <  1:924097/147‑1                                                     TTTCATGCAGGCAGCCCCAGCCCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTAGCCGATGGGGGTGTGCTTCGTCATCACCGGCCTAGGCGTGACCAACGTCGCCACCC                                                                                                            >  2:924097/1‑147                                                        CATGCAGGCAGCCCCAGCCCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATGGGGGTGTGCTTCGTCATCACCGGCCCAGGCGTGACCAACGTCGCCACCCCCATCG                                                                                                      <  2:427477/150‑1                                                                          CCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATGGGG                                                                                                                                                          <  1:1183755/80‑1                                                                          CCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATGGGG                                                                                                                                                          >  2:1183755/1‑80                                                                                                                                                            GTGCTTCGTCATCACCGGCCCAGGCGTGACCAACGTCGCCACCCCCATCGGCCAAGCCTATGCCGACTCGGTGCCGATGCTGGTGATTTCCAGCGTCAACCACACCGCCAGCCTGGGCAAGGGCTGGGGCTGCCTGCATGAAACCCAGGA  <  1:1058970/150‑1                                                                                                                                                                                                                                                                                                                   GCCACCGCAGAAAACGCCGTGATGGGCGCAGTCATGGCGCGCTGGTCCTGGGTTTCATGCAGGCAGCCCCAGCCCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATGGGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4247554‑4247709 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggggtgTGCTTCGTCATCACCGGCCCAGGCGTGACCAACGTCGCCACCCCCATCGGCCAAGCCTATGCCGACTCGGTGCCGATGCTGGTGATTTCCAGCGTCAACCACACCGCCAGCCTGGGCAAGGGCTGGGGCTGCCTGCATGAAACCCAGGA  <  NC_002947/4247747‑4247599

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.