New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4247772 | 38 (0.720) | 4 (0.080) | 4/230 | NT | 10.2% | coding (189/1608 nt) | aruI | 2‑ketoarginine decarboxylase AruI |
? | NC_002947 | = 4247810 | 35 (0.710) | coding (151/1608 nt) | aruI | 2‑ketoarginine decarboxylase AruI |
CAGCCCCAGCCCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATGGGGGTGGCGACGTTGGTCACGCCTGGGCCGGTGATGACGAAGCACACCCCCGGCTTGCCACTGACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4247617‑4247772 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgacccgcCACGAGCAGGGCGCCGGCTTCATGGCCGACGGCTACGCGCGGGTCAGTGGCAAGCCGGGGGTGTGCTTCGTCATCACCGGCCCAGGCGTGACCAACGTCGCCACCCCCATCGGCCAAGCCTATGCCGACTCGGTGCCGATGCTGGTGA < NC_002947/4247810‑4247663 CAGCCCCAGCCCTTGCCCGGGCTGGCGGTGTGGTTGACGCGGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATGGGGGTGGCGACGTTGGTCACGCCTGGGCCGGTGATGACGAAGCACACCCCCGGCTTGCCACTG > 2:1155286/1‑150 CAGCCCTTGCCCAGGCTGGCGGTGTGGTTGACGCTTGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATGGGGGTGGCGACGTTGGTCACGCCTGGGCCGGTGATGACGAAGCACACCCCCGGCTTGCCACTGACCCGC > 1:1001804/1‑150 CATCGGCACCGAGTCGGCATAGGCTTGGCCGATGGGGGTGGCGACGTTGGTCACGCCTGGGCCGGTGATGACGAAGCACACCCCCGGCTTGCCACTGACCCGCCACGAGCAGGGCGCCGGCTTCATGGCCGACGGCTACGCGCGGGTCAG < 1:367964/150‑1 TTGGCCGATGGGGGTGGCGACGTTGGTCACGCCTGGGCCGGTGATGACGAAGCACACCCCCGGCTTGCCACTGACCCGCCACGAGCAGGGCGCCGGCTTCATGGCCGACGGCTACGCGCGG < 1:795736/121‑1 TTGGCCGATGGGGGTGGCGACGTTGGTCACGCCTGGGCCGGTGATGACGAAGCACACCCCCGGCTTGCCACTGACCCGCCACGAGCAGGGCGCCGGCTTCATGGCCGACGGCTACGCGCGG > 2:795736/1‑121 ACACCCCCTGCTTGCCACGGACCCGCCACGAGCAGGGCGCCGGCTTCATGGCCGACGGCTGCGGGCGGGTCCGTGGCAAGCCGGGGGGGTGCTTCGTCATCACCGGCCCAGGCGTGACCAACGTCGCCACCCCCATCGGCCAAGCCTCTG > 2:241197/1‑150 CCGCCACGAGCAGGGCGCCGGCTTCATGGCCGACGGCTACGCGCGGGTCAGTGGCAAGCCGGGGGTGTGCTTCGTCATCACCGGCCCAGGCGTGACCAACGTCGCCACCCCCATCGGCCAAGCCTATGCCGACTCGGTGCCGATGCTGGT > 1:1018595/1‑150 CCGCCACGAGCAGGGCGCCGGCTTCATGGCCGACGGCTACGCGCGGGTCAGTGGCAAGCCGGGGGTGTGCTTCGTCATCACCGGCCCAGGCGTGACCAACGTCGCCACCCCCATCGGCCAAGCCTATGCCGACTCGGTGCCGATGCTGGT < 2:575680/150‑1 GCCACGAGCAGGGCGCCGGCTTCATGGCCGACGGCTACGAGCGGGTCAGTGGCAAGCCGGGAGTGTGCTTCCTCATCACCGGCCCAGGCGTGACCAAAGTCGCCACCCCCATCGGCCAAGCCTATGCCGACTCGGTGCCGATGCTGGTGA < 1:648531/150‑1 CAGCCCCAGCCCTTGCCCAGGCTGGCGGTGTGGTTGACGCTGGAAATCACCAGCATCGGCACCGAGTCGGCATAGGCTTGGCCGATGGGGGTGGCGACGTTGGTCACGCCTGGGCCGGTGATGACGAAGCACACCCCCGGCTTGCCACTGACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4247617‑4247772 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgacccgcCACGAGCAGGGCGCCGGCTTCATGGCCGACGGCTACGCGCGGGTCAGTGGCAAGCCGGGGGTGTGCTTCGTCATCACCGGCCCAGGCGTGACCAACGTCGCCACCCCCATCGGCCAAGCCTATGCCGACTCGGTGCCGATGCTGGTGA < NC_002947/4247810‑4247663 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |