New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4294641	31 (0.590)	3 (0.060)	3/238	NT	7.9%	coding (776/1302 nt)	opdN	outer‑membrane porin D
	?	NC_002947	= 4294679	40 (0.790)					coding (738/1302 nt)	opdN	outer‑membrane porin D

ATACATGCGCTGCCAGCCGGCGCTGAGCTTGTGGCCACCGAGGCTGTAGCCAAGCATGCCGCTGAAGGCGCGATGGTCGATTTCGCCCGCACGGGCATTGCCGATGTCATCACTCTTGATCAGGCGCATGTCAGCCGACAGGCTGCCCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4294490‑4294641 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgCCAGCACTTCCTCGGCCTGGTGGCCAGTCAGCCGCTGCCGGTGGGCAGCCTGTCGGCTGACATGCGCCTGATCAAGAGTGATGACATCGGCAATGCCCGTGCGGGCGAAATCGACCATCGCGCCTTCAGCGGCATGCTTGGCTACA  <  NC_002947/4294679‑4294534                                                                                                                                                                                                                                                                                                            ATACATGCGCTGCCAGCCGGCGCTGAGCTTGTGGCCACCGAGGCTGTAGCCAAGCATGCCGCTGAAGGCGCGATGGTCGATTTCGCCCGCACGGGCATTGCCGATGTCATCACTCTTGATCAGGCGCATGTCAGCCGACAGGCTGCCCAC                                                                                                                                                      >  2:1346716/1‑150                                         AGGCTGTAGCCAAGCATGCCGCTGAAGGCGCGATGGTCGATTTCGCCCGCACGGGCATTGCCGATGTCATCACTCTTGATCAGGCGCATGTCAGCCGACAGGCTGCCCACCGCCAGCACTTCCTCGGCCTGGTGGCCAGTCAGCCGCTGC                                                                                                              <  2:1210312/150‑1                                               TAGCCAAGCATGCCGCTGAAGGCGCGATGGTCGATTTCGCCCGCACGGGCATTGCCGATGTCATCACTCTTGATCAGGCGCATGTCAGCCGACAGGCTGCCCACCGCCAGCACTTCCTCGGCCTGGTGGCCAGTCAGCCGCTGCCGGTGG                                                                                                        <  1:545406/150‑1                                                             GCTGAAGGCGCGATGGTCGATTTCGCCCGCACGGGCATTGCCGATGTCATCACTCTTGATCAGGCGCATGTCAGCCGACAGGCTGCCCACCGCCAGCACTTCCTCGGCCTGGTGGCCAGTCAGCCGCTGCCGGTGGGCAGCCTGTCGGCT                                                                                          <  2:597442/150‑1                                                                                                                                                     ACCGCCAGCACTTCCTCGGCCTGGTGGCCAGTCAGCCGCTGCCGGTGGGCAGCCTGTCGGCTGACATGCGCCTGATCAAGAGTGATGACATCGGCAATGCCCGTGCGGGCGAAATCGACCATCGCGCCTTCAGCGGCATGCTTGGCTACA  <  2:1408566/150‑1                                                                                                                                                        GCCAGCACTTCCTCGGCCTGGTGGCCAGTCAGCCGCTGCCGGTGGGCAGCCTGTCGGCTGACATGCGC                                                                                 >  1:203195/1‑68                                                                                                                                                        GCCAGCACTTCCTCGGCCTGGTGGCCAGTCAGCCGCTGCCGGTGGGCAGCCTGTCGGCTGACATGCGC                                                                                 <  2:203195/68‑1                                                                                                                                                                                                                                                                                                            ATACATGCGCTGCCAGCCGGCGCTGAGCTTGTGGCCACCGAGGCTGTAGCCAAGCATGCCGCTGAAGGCGCGATGGTCGATTTCGCCCGCACGGGCATTGCCGATGTCATCACTCTTGATCAGGCGCATGTCAGCCGACAGGCTGCCCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4294490‑4294641 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgCCAGCACTTCCTCGGCCTGGTGGCCAGTCAGCCGCTGCCGGTGGGCAGCCTGTCGGCTGACATGCGCCTGATCAAGAGTGATGACATCGGCAATGCCCGTGCGGGCGAAATCGACCATCGCGCCTTCAGCGGCATGCTTGGCTACA  <  NC_002947/4294679‑4294534

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.