New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4294641	31 (0.590)	3 (0.060)	3/238	NT	7.9%	coding (776/1302 nt)	opdN	outer‑membrane porin D
	?	NC_002947	= 4294679	40 (0.790)					coding (738/1302 nt)	opdN	outer‑membrane porin D

TGTAGCCAAGCATGCCGCTGAAGGCGCGATGGTCGATTTCGCCCGCACGGGCATTGCCGATGTCATCACTCTTGATCAGGCGCATGTCAGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAGGCATAACGCTTGTTCTTGCAGTGCACGCGGATGTCCTGG  >  NC_002947/4294534‑4294823                                                                                                                                                  |                                                                                                                                                 tGTAGCCAAGCATGCCGCTGAAGGCGCGATGGTCGATTTCGCCCGCACGGGCATTGCCGATGTCATCACTCTTGATCAGGCGCATGTCAGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGcggt                                                                                                                                              <  2:1408566‑M2/150‑5 (MQ=255)             tGCCGCTGAAGGCGCGATGGTCGATTTCGCCCGCACGGGCATTGCCGATGTCATCACTCTTGATCAGGCGCATGTCAGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCa                                                                                                                                  <  1:918443/150‑1 (MQ=255)              gCCGCTGAAGGCGCGATGGTCGATTTCGCCCGCACGGGCATTGCCGATGTCATCACTCTTGATCAGGCGCATGTCAGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAg                                                                                                                                 <  1:694208/150‑1 (MQ=255)                cGCTGAAGGCGCGATGGTCGATTTCGCCCGCACGGGCATTGCCGATGTCATCACTCTTGATCAGGCGCATGTCAGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCt                                                                                                                               >  1:852464/1‑150 (MQ=255)                            gATGGTCGATTTCGCCCGCACGGGCATTGCCGATGTCATCACTCTTGATCAGGCGCATGTCAGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGt                                                                                                                   >  1:1165426/1‑150 (MQ=255)                            gATGGTCGATTTCGCCCGCACGGGCATTGCCGATGTAATCACTCTTAGTCAGGCGCATGTCAGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGt                                                                                                                   >  2:984814/1‑150 (MQ=255)                                             gCACGGGCATTGCCGATGTCATCACTCTTGATCAGGCGCATGTCAGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGc                                                                                                  >  2:809468/1‑150 (MQ=255)                                                           gATGTCATCTCTTTTTATCAGTCGCATGTAAGCCGAAAGTCTGCACACCGGCAGCGGCTGTCTGCCTACCAGGCCGTGTAACTGCTTGCGGTAGATATTCTCCAGCTTGGCCACTTGGTAATGGGCGCCGAAACGCTCGTCGAAACGGTa                                                                                    <  2:79975/150‑1 (MQ=255)                                                           gATGTCATCACTTTTGATCAGGCGGATGTCAGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTa                                                                                    <  2:329441/150‑1 (MQ=255)                                                                  tcaCTCTTGATCAGGCGCATGTCAGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGaca                                                                             >  2:686877/1‑150 (MQ=255)                                                                  tcaCTCTTGATCAGGCGCATGTCAGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGaca                                                                             >  1:417839/1‑150 (MQ=255)                                                                    aCTCTTGATCAGGCGCATGTCGGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGgc                                                                                                            >  2:1272433/1‑117 (MQ=255)                                                                    aCTCTTGATCAGGCGCATGTCGGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGgc                                                                                                            <  1:1272433/117‑1 (MQ=255)                                                                        ttGATCAGGCGCATGTCAGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACgg                                                                                      <  2:548116/135‑1 (MQ=255)                                                                        ttGATCAGGCGCATGTCAGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACgg                                                                                      >  1:548116/1‑135 (MQ=255)                                                                        ttGATCAGGCGCATGTCAGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGcc                                                                       >  2:1117149/1‑150 (MQ=255)                                                                          gATCAGGCGCATGTCAGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAg                                                                     >  1:78254/1‑150 (MQ=255)                                                                            tCAGGCGCATGTCAGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGt                                                                   <  1:809468/150‑1 (MQ=255)                                                                                gcgcATGTCAGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGc                                                                                                                                                 >  1:203195‑M2/1‑67 (MQ=255)                                                                                gcgcATGTCAGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGc                                                                                                                                                 <  2:203195‑M2/68‑2 (MQ=255)                                                                                gcgcATGTCAGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGaa                                                               <  1:1117149/150‑1 (MQ=255)                                                                                         aGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGcggtgggcagcctgtcggctgacatgcgcctgatcaagagtgatgacatcggcaatgcccgtgcgggcgaaatcgaccatcgcgccttcagc                                                      <  2:597442‑M2/150‑93 (MQ=255)                                                                                             gACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCtggc                                                  <  1:984814/150‑4 (MQ=255)                                                                                             gACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACGTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCg                                                  <  1:992661/150‑1 (MQ=255)                                                                                                 ggCTGGTCACCGGCAGTGGCTTACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTAt                                              <  1:92609/150‑1 (MQ=255)                                                                                                    tGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCgg                                           >  1:767526/1‑149 (MQ=255)                                                                                                      cccACCGGCAGCGGCCGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAg                                         <  1:1346716/150‑1 (MQ=255)                                                                                                       ccACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGcggtgggcagcctgtcggctgacatgcgcctgatcaagagtgatgacatcggcaatgcccgtgcgggcgaaatcgaccatcgcgccttcagcggcatgcttggcta                                        <  1:545406‑M2/150‑107 (MQ=255)                                                                                                        cagcGGCAACGGCTGACTGGACACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGACCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAGGc                                       >  2:413865/4‑150 (MQ=255)                                                                                                        cACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAAc                                                                                                    >  1:1016820/1‑89 (MQ=255)                                                                                                        cACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAAc                                                                                                    <  2:1016820/89‑1 (MQ=255)                                                                                                             gCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGcggtgggcagcctgtcggctgacatgcgcctgatcaagagtgatgacatcggcaatgcccgtgcgggcgaaatcgaccatcgcgccttcagcggcatgcttggctacagcct                                  <  2:1210312‑M2/150‑113 (MQ=255)                                                                                                                 cGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAGGCATAACGCtt                              <  1:586943/150‑1 (MQ=255)                                                                                                                   gCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAGGCATAACGCTTGt                            <  1:1408566/150‑1 (MQ=255)                                                                                                                     tGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAGGCATAACGCCTGTTc                          >  1:842173/1‑150 (MQ=255)                                                                                                                      gACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAGGCATAACGCTTGTTCt                         >  1:683022/1‑150 (MQ=255)                                                                                                                         tGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAGGCATAACGCTTGTTCTTGc                      >  1:528818/1‑150 (MQ=255)                                                                                                                         tGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAGGCATAACGCTTGTTCTTGc                      >  2:1242679/1‑150 (MQ=255)                                                                                                                         tGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAGGCATAACGCTTGTTCTTGc                      >  1:39595/1‑150 (MQ=255)                                                                                                                         tGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAGGCATAACGCTTGTTCTTGc                      >  2:790584/1‑150 (MQ=255)                                                                                                                           gCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAGGCATAACGCTTGTTCTTGCAg                    >  2:815926/1‑150 (MQ=255)                                                                                                                             caccaGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAGGCATAACGCTTGTTCTTGCAGTg                  <  2:852464/150‑1 (MQ=255)                                                                                                                              accaGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAGGCATAACGCTTGTTCTTGCAGTGc                 >  1:286763/1‑150 (MQ=255)                                                                                                                              accaGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAGGCATAACGCTTGTTCTTGCAGTGc                 >  2:961272/1‑150 (MQ=255)                                                                                                                                     cGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAGGCATAACGCTTGTTCTTGCAGTGCACGCGGa          >  2:195630/1‑150 (MQ=255)                                                                                                                                             tGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAGGCATAACGCTTGTTCTTGCAGTGCACGCGGATGTCCTgg  <  2:767526/150‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                 TGTAGCCAAGCATGCCGCTGAAGGCGCGATGGTCGATTTCGCCCGCACGGGCATTGCCGATGTCATCACTCTTGATCAGGCGCATGTCAGCCGACAGGCTGCCCACCGGCAGCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAGGCATAACGCTTGTTCTTGCAGTGCACGCGGATGTCCTGG  >  NC_002947/4294534‑4294823

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.