| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4492810 | 36 (0.680) | 4 (0.080) | 4/230 | NT | 10.3% | coding (649/783 nt) | PP_3983 | hypothetical protein |
| ? | NC_002947 | = 4492819 | 36 (0.730) | coding (658/783 nt) | PP_3983 | hypothetical protein | |||||
AGCAATCCAAGCGACGAGTTCACCCATCTCTACGAAATCCTAGAAGCCCTACAAAGCAAGTTCGTGAAACCGGCGACATTGATCAACGAGCTTGGGATCGAGAAAGCGAAGGTTCGCAAATTCCATTCAGTCTGCAATGACCCATCAACTGCCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4492654‑4492810‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccagccCTCGGTGGCGGCTGGCAGTTGATGGGTCATTGCAGACTGAATGGAATTTGCGAACCTTCGCTTTCTCGATCCCAAGCTCGTTGATCAATGTCGCCGGTTTCACGAACTTGCTTTGTAGGGCTTCTAGGATTTCGTAGAGATGGGTGAAC < NC_002947/4492819‑4492671 AGCAATCCAAGCGACGAGTTCACCCATCTCTACGAAATCCTAGAAGCCCTACAAAGCAAGTTCGTGAAACCGGCGACATTGATCAACGAGCTTGGGATCGAGAAAGCGAAGGTTCGCAAATTCCATTCAGTCTGCAATGACCCATCAACT < 1:458273/150‑1AGCAATCCAAGCGACGAGTTCACCCATCTCTACGAAATCCTAGAAGCCCTACAAAGCAAGTTCGTGAAACCGGCGACATTGATCAACGAGCTTGGGATCGAGAAAGCGAAGGTTCGCAAATTCCATTCAGTCTGCAATGACCCATCAACT > 2:25647/1‑150 ATCCAAGCGACGAGTTCACCCATCTCTACGAAATCCTAGAAGCCCTACAAAGCAAGTTCGTGAAACCGGCGACATTGATCAACGAGCTTGGGATCGAGAAAGCGAAGGTTCGCAAATTCCATTCAGTCTGCAATGACGCATCAACTGCCA > 1:627357/1‑150 ACCCATCTCTACGAAATCCTAGAAGCCCTACAAAGCAAGTTCGTGAAACCGGCGACATTGATCAACGAGCTTGGGATCGAGAAAGCGAAGGTTCGCAAATTCCATTCAGTCTGCAATGACCCATCAACTGCCAGCC > 1:571960/1‑136 ACCCATCTCTACGAAATCCTAGAAGCCCTACAAAGCAAGTTCGTGAAACCGGCGACATTGATCAACGAGCTTGGGATCGAGAAAGCGAAGGTTCGCAAATTCCATTCAGTCTGCAATGACCCATCAACTGCCAGCC < 2:571960/136‑1 TACGAAATCCTAGAAGCCCTACAAAGCAAGTTCGTGAAACCGGCGACATTGATCAACGAGCTTGGGATCGAGAAAGCGAAGGTTCGCAAATTCCATTCAGTCTGCAATGACCCATCAACTGCCAGCCCTCGGTGGCGGCTGGCAGTTGAT > 1:845153/1‑150 GAAAGCGAAGGTTCGCAAATTCCATTCAGTCTGCAATGACCCATCAACTGCCAGCCCTCGGTGGCGGCTGG < 1:707426/71‑1 GAAAGCGAAGGTTCGCAAATTCCATTCAGTCTGCAATGACCCATCAACTGCCAGCCCTCGGTGGCGGCTGG > 2:707426/1‑71 GTCTGCAGTGACCCATCAACTGCCAGCCGCCACCGAGGGCTGGCAGTTGATGGGTCATTGCAGACTGAATGGAATTTGCGAACCTTCGCTTTCTCGATCCCAAGCTCGTTGATCAATGTCGCCGGTTTCACGAACTTGCTTTGTAGGGCT > 2:845153/1‑150 CCCTCGGTGGCGGCTGGCAGTTGATGGGTCATTGCAGACTGAATGGAATTTGCGAACCTTCGCTTTCTCGATCCCAAGCTCGT > 1:367945/1‑83 CCCTCGGTGGCGGCTGGCAGTTGATGGGTCATTGCAGACTGAATGGAATTTGCGAACCTTCGCTTTCTCGATCCCAAGCTCGT < 2:367945/83‑1 CCTCGGTGGCGGCTGGCAGTTGATGGGTCATTGCAGACTGAATGGAATTTGCGAACCTTCGCTTTCTCGATCCCAAGCTCGTTGATCAATGTCGCCGGTTTCACGAACTTGCTTTGTAGGGCTTCTAGGATTTCGTAGAGATGGGTGAAC < 2:863255/150‑1 AGCAATCCAAGCGACGAGTTCACCCATCTCTACGAAATCCTAGAAGCCCTACAAAGCAAGTTCGTGAAACCGGCGACATTGATCAACGAGCTTGGGATCGAGAAAGCGAAGGTTCGCAAATTCCATTCAGTCTGCAATGACCCATCAACTGCCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4492654‑4492810‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccagccCTCGGTGGCGGCTGGCAGTTGATGGGTCATTGCAGACTGAATGGAATTTGCGAACCTTCGCTTTCTCGATCCCAAGCTCGTTGATCAATGTCGCCGGTTTCACGAACTTGCTTTGTAGGGCTTCTAGGATTTCGTAGAGATGGGTGAAC < NC_002947/4492819‑4492671 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |