New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4837267	51 (0.970)	4 (0.080)	4/240	NT	7.2%	coding (1229/1425 nt)	ccoN‑I	cbb3‑type cytochrome c oxidase subunit 1
	?	NC_002947	= 4837288	54 (1.050)					coding (1250/1425 nt)	ccoN‑I	cbb3‑type cytochrome c oxidase subunit 1

GGCGCGCTGTACCACACCATCCCCAAAGTGTTCGGCAAAGAACGCATGTACAGCCTCGGCCTGATCAATGCGCACTTCTGGCTGGCCACCATCGGTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCCCAGGGCCTGATGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4837116‑4837267 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgCCGTCGCTGTTGACCGCGCGCCACATCA  <  NC_002947/4837288‑4837261                                                                                                                                                                                      GGCGCGCTGTACCACACCATCCCCAAAGTGTTCGGCAAAGAACGCATGTACAGCCTCGGCCTGATCAATGCGCACTTCTGGCTGGCCACCATCGGTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCCCAGGGCCTGATG                                >  1:454730/1‑150                                                                            TTCTGGCTGGCCACCATCGGTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCCCAGGGCCTGATGTGCCGTCGCTGTTGACCGCGCGCCACAT    >  1:1277109/1‑103                                                                            TTCTGGCTGGCCACCATCGGTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCCCAGGGCCTGATGTGCCGTCGCTGTTGACCGCGCGCCACAT    <  2:1277109/103‑1                                                                             TCTGGCTGGCCACCATCGGTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCCCAGGGCCTGATGTGCCGTCGCTGTTGACCGCGCGCCACATCA  <  1:118823/104‑1                                                                             TCTGGCTGGCCACCATCGGTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCCCAGGGCCTGATGTGCCGTCGCTGTTGACCGCGCGCCACATCA  >  2:118823/1‑104                                                                                                                                                                                      GGCGCGCTGTACCACACCATCCCCAAAGTGTTCGGCAAAGAACGCATGTACAGCCTCGGCCTGATCAATGCGCACTTCTGGCTGGCCACCATCGGTACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCGCCCAGGGCCTGATGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4837116‑4837267 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgCCGTCGCTGTTGACCGCGCGCCACATCA  <  NC_002947/4837288‑4837261

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.