New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5080875 | 40 (0.760) | 4 (0.080) | 4/234 | NT | 9.4% | coding (712/1236 nt) | lysC | aspartokinase |
? | NC_002947 | = 5080881 | 39 (0.780) | coding (706/1236 nt) | lysC | aspartokinase |
TCTTCATCAATGGTAATGAGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5080853‑5080875 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagggt‑CCGGGTACCCTCATTACCATTGATGAAGAGGAATCCATGGAACAGCCGATCATTTCCGGTATCGCCTTCAACCGTGATGAAGCAAAGCTGACCATTCGCGGCGTGCCGGATACCCCGGGCGTGGCCTTCAAGATCCTCGGCCCGA < NC_002947/5080881‑5080737 TCTTCATCAATGGTAATGAGGGTACCCGG‑ACCCTCATTACCATTGATGAAGAGGAATCCATGGAACAGCCGATCATTTCCGGTATCGCC > 1:1349812/1‑89 TCTTCATCAATGGTAATGAGGGTACCCGG‑ACCCTCATTACCATTGATGAAGAGGAATCCATGGAACAGCCGATCATTTCCGGTATCGCC < 2:1349812/89‑1 ATGGTAATGAGGGT‑ACCCGGACCCTCATTACCATTGATGAAGAGGAATCCATGGAACAGCCGATCATTTCCGGTATCGC < 1:673068/79‑1 ATGGTAATGAGGGT‑ACCCGGACCCTCATTACCATTGATGAAGAGGAATCCATGGAACAGCCGATCATTTCCGGTATCGC > 2:673068/1‑79 AGGGT‑CCGGGTACCCTCATTACCATTGATGAAGAGGAATCCATGGAACAGCCGATCATTTCCGGTATCGCCTTCAACCGTGATGAAGCAAAGCTGACCATTCGCGGCGTGCCGGATACCCCGGGCGTGGCCTTCAAGATCCTCGGCCCGA < 2:718426/150‑1 TCTTCATCAATGGTAATGAGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5080853‑5080875 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagggt‑CCGGGTACCCTCATTACCATTGATGAAGAGGAATCCATGGAACAGCCGATCATTTCCGGTATCGCCTTCAACCGTGATGAAGCAAAGCTGACCATTCGCGGCGTGCCGGATACCCCGGGCGTGGCCTTCAAGATCCTCGGCCCGA < NC_002947/5080881‑5080737 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |