| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5189284 = | 44 (0.840) | 4 (0.080) | 4/234 | NT | 8.6% | coding (70/294 nt) | PP_4569 | hypothetical protein |
| ? | NC_002947 | 5189342 = | 43 (0.860) | coding (12/294 nt) | PP_4569 | hypothetical protein | |||||
TGGTCTAACCGGCATCTTTGCGGGGCAAGCCCGCTGCCACAGGTGCGGCTGATCCTTCAAGGACGAGGGCGCGCGCGTGGAAGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5189370‑5189284‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgggCTTGCCCCGCAAAGATGCCGGTTAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATC > NC_002947/5189342‑5189489 TGGTCTAACCGGCATCTTTGCGGGGCAAGCCCGCTGCCACAGGTGCGGCTGATCCTTCAAGGACGAGGGCGCGCGCGTGGAAGCGG < 1:561683/86‑1TGGTCTAACCGGCATCTTTGCGGGGCAAGCCCGCTGCCACAGGTGCGGCTGATCCTTCAAGGACGAGGGCGCGCGCGTGGAAGCGG > 2:561683/1‑86 CCCGCTGCCACAGGTGCGGCTGATCCTTCAAGGACGAGGGCGCGCGCGTGGAAGCGGGCTTGCCCCGCAAAGATGCCGGTTAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCA > 1:1284526/1‑150 GCTGCCACAGGTGCGGCTGATCCTTCAAGGACGAGGGCGCGCGCGTGGAAGCGGGCTTGCCCCGCAAAGATGCCGGTTAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCA > 1:382372/1‑150 GGCTGATCCTTCAAGGACGAGGGCGCGCGCGTGGAAGCGGGCTTGCCCCGCAAAGATGCCGGTTAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTG < 2:1284526/150‑1 CGAGGGCGCGCGCGTGGAAGCGGGCTTGCCCCGCAAAGATGCCGGTTAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAA < 2:382372/150‑1 AGCGGGCTTGCCCCGCAAAGATGCCGGTTAGACCAGAAAATATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCT > 1:1356163/1‑150 AGCGGGCTTGCCCCGCAAAGATGCCGGTTAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCT > 2:974715/1‑150 GCGGGCTTGCCCCGCAAAGATGCCGGTTAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCA > 1:1002570/1‑97 GCGGGCTTGCCCCGCAAAGATGCCGGTTAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCA < 2:1002570/97‑1 GGCTTGCCCCGCAAAGATGCCGGTTAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATC > 1:1132565/1‑150 TGGTCTAACCGGCATCTTTGCGGGGCAAGCCCGCTGCCACAGGTGCGGCTGATCCTTCAAGGACGAGGGCGCGCGCGTGGAAGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5189370‑5189284‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgggCTTGCCCCGCAAAGATGCCGGTTAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATC > NC_002947/5189342‑5189489 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |