| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5328155 = | 49 (0.930) | 6 (0.120) | 6/238 | NT | 11.8% | coding (232/1038 nt) | PP_4688 | heme/hemin ABC transporter permease |
| ? | NC_002947 | 5328192 = | 42 (0.830) | coding (195/1038 nt) | PP_4688 | heme/hemin ABC transporter permease | |||||
AGCCTGCCAATGTTCGATACCCTGCGCGCTGGCCTGCGCCTGTTGGGGCTGCCCGTTTCCGAAGATGGCCTGCAGCAGGCCGAGATGATCCTTGGTCAGATCCGCCTGCCGCGCACCCTGTTGGGGTTGGCGGTGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5328293‑5328155‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgGATCTGACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCCAGCGCCAGTGACAGCCAGATCGCCAACAGGCACAGCA > NC_002947/5328192‑5328340 AGCCTGCCAATGTTCGATACCCTGCGCGCTGGCCTGCGCCTGTTGGGGCTGCCCGTTTCCGAAGATGGCCTGCAGCAGTCCGAGATGATCCTTGGTCAGATCCGCCTGCCGCGCACCCTGTTGGGGTTGGCGGTGG > 1:530404/1‑136AGCCTGCCAATGTTCGATACCCTGCGCGCTGGCCTGCGCCTGTTGGGGCTGCCCGTTTCCGAAGATGGCCTGCAGCAGGCCGAGATGATCCTTGGTCAGATCCGCCTGCCGCGCACCCTGTTGGGGTTGGCGGTGG < 2:530404/136‑1 CGAGATGATCCTTGGTCAGATCCGCCTGCCGCGCACCCTGTTGGGGTTGGCGGTGGGCGGA < 1:1279840/61‑1 CGAGATGATCCTTGGTCAGATCCGCCTGCCGCGCACCCTGTTGGGGTTGGCGGTGGGCGGA > 2:1279840/1‑61 GATCCGCCTGCCGCGCACCCTGTTGGGGTTGGCGGTGGGCGGATCTGACCAAGGATCATCTCGGCCTGCTGCAGG > 1:90527/1‑75 GATCCGCCTGCCGCGCACCCTGTTGGGGTTGGCGGTGGGCGGATCTGACCAAGGATCATCTCGGCCTGCTGCAGG < 2:90527/75‑1 CCGCCTGCCGCGCACCCTGTTGGGGTTGGCGGTGGGCGGATCTGACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCC > 2:89484/1‑150 CGCCTGCCGCGCACCCTGTTGGGGTTGGCGGTGGGCGGATCTGACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCCA > 1:708467/1‑150 GCCTGCCGCGCACCCTGTTGGGGTTGGCGGTGGGCGGATCTGACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCCAG > 2:572706/1‑150 ACCCTGTTGGGGTTGGCGGTGGGCGGATCTGACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCCAGCGCCAGTGACA < 1:572706/150‑1 GGATCTGACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCCAGCGCCAGTGACAGCCAGATCGCCAACAGGCACAGCA > 1:1277599/1‑150 GGATCTGACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCCAGCGCCAGTGACAGCCAGATCGCCAACAGGCACAGCA < 2:602544/150‑1 AGCCTGCCAATGTTCGATACCCTGCGCGCTGGCCTGCGCCTGTTGGGGCTGCCCGTTTCCGAAGATGGCCTGCAGCAGGCCGAGATGATCCTTGGTCAGATCCGCCTGCCGCGCACCCTGTTGGGGTTGGCGGTGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5328293‑5328155‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgGATCTGACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCCAGCGCCAGTGACAGCCAGATCGCCAACAGGCACAGCA > NC_002947/5328192‑5328340 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |