| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5328155 = | 49 (0.930) | 6 (0.120) | 6/238 | NT | 11.8% | coding (232/1038 nt) | PP_4688 | heme/hemin ABC transporter permease |
| ? | NC_002947 | 5328192 = | 42 (0.830) | coding (195/1038 nt) | PP_4688 | heme/hemin ABC transporter permease | |||||
AGCATCCGGCATGCCGCCAAACCAGGCGCCGCCGACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGC > NC_002947/5328006‑5328300 | tgctgtgcctgttggcgatctggctgtcactggcgctggggccagtcagcctgccaatgttcgataccctgcgcgctggcctgcgcctgttggggctgcccgtttccgaagatggcctgcagcaggccgagatgatccttggtcagatcc > 1:1277599‑M1/150‑150 (MQ=255)tgctgtgcctgttggcgatctggctgtcactggcgctggggccagtcagcctgccaatgttcgataccctgcgcgctggcctgcgcctgttggggctgcccgtttccgaagatggcctgcagcaggccgagatgatccttggtcagatcc < 2:602544‑M1/1‑1 (MQ=255) aTCCGGCATGCCGCCAAACCAGGCGCCGCCGACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGcc > 2:840331/1‑150 (MQ=255) aTCCGGCATGCCGCCAAACCAGGCGCCGCCGACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGcc > 1:88957/1‑150 (MQ=255) gCATGCCGCCAAACCAGGCGCCGCCGACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCg > 2:633560/1‑150 (MQ=255) cATGCCGCCAAACCAGGCGCCGCCGACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGc < 1:892981/150‑1 (MQ=255) gccAAACCAGGCGCCGCCGACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAAccc > 1:1392872/1‑150 (MQ=255) gccAAACCAGGCGCCGCCGACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAAccc > 2:131329/1‑150 (MQ=255) cAAACCAGGCGCCGCCGACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGAAGGGCCAGCGGGTTGCGGAACAGAACAAACAAAGCAACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCa > 1:673280/1‑150 (MQ=255) aCCAGGCGCCGCCGACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACa > 2:705819/1‑150 (MQ=255) cAGGCGCCGCCGACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAgg < 2:76766/150‑1 (MQ=255) aGGCGCCGCCGACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAggg < 2:1208295/150‑1 (MQ=255) tgtcactggcgctggggccagtcagcctgccaatgttcgataccctgcgcgctggcctgcgcctgttggggctgcccgtttccgaagatggcctgcagcaggccgagatgatccttggtcagatcCGCCCACCGCCAACCCCAACAGGGt < 1:572706‑M1/25‑1 (MQ=255) ggCGCCGCCGACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGt < 2:102758/150‑1 (MQ=255) cgACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCa < 2:274869/150‑1 (MQ=255) aCAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAgg > 2:654288/1‑150 (MQ=255) ctggggccagtcagcctgccaatgttcgataccctgcgcgctggcctgcgcctgttggggctgcccgtttccgaagatggcctgcagcaggccgagatgatccttggtcagatcCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGc > 2:572706‑M1/115‑150 (MQ=255) tggggccagtcagcctgccaatgttcgataccctgcgcgctggcctgcgcctgttggggctgcccgtttccgaagatggcctgcagcaggccgagatgatccttggtcagatcCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCg > 1:708467‑M1/114‑150 (MQ=255) ggggccagtcagcctgccaatgttcgataccctgcgcgctggcctgcgcctgttggggctgcccgtttccgaagatggcctgcagcaggccgagatgatccttggtcagatcCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCgg > 2:89484‑M1/113‑150 (MQ=255) gCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATc < 1:745418/150‑1 (MQ=255) aaCCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGCCGGCGAGCAGGTGGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTg > 2:1141586/1‑150 (MQ=255) aCCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑a < 2:937281/150‑1 (MQ=255) cTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTgcgc < 2:1386903/131‑1 (MQ=255) cTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTgcgc > 1:1386903/1‑131 (MQ=255) tGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCACCCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAg < 1:113285/150‑1 (MQ=255) aCCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCa < 2:332775/150‑1 (MQ=255) cccTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATc > 2:315154/1‑150 (MQ=255) cccTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATc > 1:163707/1‑150 (MQ=255) ccTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCt > 1:121828/1‑150 (MQ=255) cTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCtt > 2:1104893/1‑150 (MQ=255) tACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCAGCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTc < 1:86935/150‑1 (MQ=255) tACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTc < 2:88957/150‑1 (MQ=255) aCCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCg < 1:705819/150‑1 (MQ=255) cGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACgg < 2:1072460/150‑1 (MQ=255) gggTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGc < 1:1104893/150‑1 (MQ=255) gggTCGGCCAGCGGGTTGCAAAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGc < 1:1324009/150‑1 (MQ=255) ggCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGccc < 1:840331/150‑1 (MQ=255) gCCAGCGGATTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCTCGCCCACCGCCAACCCCAACAGGGTGAGCGGCAGGAGGA‑CTGTACCAACGAGCTTCGCCTGCGGCTGCAGGCCATCTTCGGAAACGGGCAGcccc > 2:666647/1‑150 (MQ=255) aGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAAc < 1:131329/150‑1 (MQ=255) gCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAg < 1:1188706/150‑1 (MQ=255) aCAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCac > 2:507527/1‑149 (MQ=255) ccccTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGc > 1:1063490/1‑71 (MQ=255) ccccTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGc < 2:1063490/71‑1 (MQ=255) cctgcagcaggccgagatgatccttggtcagatcCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATc > 1:90527‑M1/35‑75 (MQ=255) cctgcagcaggccgagatgatccttggtcagatcCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATc < 2:90527‑M1/41‑1 (MQ=255) ccTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAg < 2:796654/103‑1 (MQ=255) ccTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAg > 1:796654/1‑103 (MQ=255) ccTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCa < 1:654288/150‑1 (MQ=255) cTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAg < 2:426963/150‑1 (MQ=255) tGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAgg < 1:955015/150‑1 (MQ=255) cATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACg < 1:1042919/115‑1 (MQ=255) cATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACg > 2:1042919/1‑115 (MQ=255) ggCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACggg < 2:20436/114‑1 (MQ=255) ggCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACggg > 1:20436/1‑114 (MQ=255) ggCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATc > 2:754837/1‑150 (MQ=255) cACCCCGGACAGCGCCAGCACCGCGCACACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGaa > 1:399153/1‑150 (MQ=255) cccGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACAt > 1:977454/1‑150 (MQ=255) ccagACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGCTTCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGTGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACAtt < 2:1029597/147‑1 (MQ=255) gcCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCGTCGCTGCATCGGAAACGGGCAGCCCCAACAGGAGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTg > 1:602544/1‑150 (MQ=255) cACCGCGCCCACCGCCCTCACCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGTAGCCCCAACGGGAGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTgg < 1:1141586/150‑1 (MQ=255) aCCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGc < 2:293530/150‑1 (MQ=255) tcCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCg < 1:1279840‑M1/59‑1 (MQ=255) tcCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCg > 2:1279840‑M1/3‑61 (MQ=255) | AGCATCCGGCATGCCGCCAAACCAGGCGCCGCCGACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGC > NC_002947/5328006‑5328300 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |