| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5328155 = | 49 (0.930) | 6 (0.120) | 6/238 | NT | 11.8% | coding (232/1038 nt) | PP_4688 | heme/hemin ABC transporter permease |
| ? | NC_002947 | 5328192 = | 42 (0.830) | coding (195/1038 nt) | PP_4688 | heme/hemin ABC transporter permease | |||||
ATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCCAGCGCCAGTGACAGCCAGATCGCCAACAGGCACAGCAG > NC_002947/5328043‑5328341 | ggggccagtcagcctgccaatgttcgataccctgcgcgctggcctgcgcctgttggggctgcccgtttccgaagatggcctgcagcaggccgagatgatccttggtcagatcCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCgg > 2:89484‑M1/113‑150 (MQ=255) gCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATc < 1:745418/150‑1 (MQ=255) aaCCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGCCGGCGAGCAGGTGGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTg > 2:1141586/1‑150 (MQ=255) aCCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑a < 2:937281/150‑1 (MQ=255) tGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCACCCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAg < 1:113285/150‑1 (MQ=255) aCCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCa < 2:332775/150‑1 (MQ=255) cccTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATc > 2:315154/1‑150 (MQ=255) cccTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATc > 1:163707/1‑150 (MQ=255) ccTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCt > 1:121828/1‑150 (MQ=255) cTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCtt > 2:1104893/1‑150 (MQ=255) tACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCAGCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTc < 1:86935/150‑1 (MQ=255) tACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTc < 2:88957/150‑1 (MQ=255) aCCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCg < 1:705819/150‑1 (MQ=255) cGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACgg < 2:1072460/150‑1 (MQ=255) gggTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGc < 1:1104893/150‑1 (MQ=255) gggTCGGCCAGCGGGTTGCAAAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGc < 1:1324009/150‑1 (MQ=255) ggCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGccc < 1:840331/150‑1 (MQ=255) gCCAGCGGATTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCTCGCCCACCGCCAACCCCAACAGGGTGAGCGGCAGGAGGA‑CTGTACCAACGAGCTTCGCCTGCGGCTGCAGGCCATCTTCGGAAACGGGCAGcccc > 2:666647/1‑150 (MQ=255) aGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAAc < 1:131329/150‑1 (MQ=255) gCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAg < 1:1188706/150‑1 (MQ=255) aCAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCac > 2:507527/1‑149 (MQ=255) cctgcagcaggccgagatgatccttggtcagatcCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATc < 2:90527‑M1/41‑1 (MQ=255) cctgcagcaggccgagatgatccttggtcagatcCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATc > 1:90527‑M1/35‑75 (MQ=255) ccTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAg < 2:796654/103‑1 (MQ=255) ccTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAg > 1:796654/1‑103 (MQ=255) ccTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCa < 1:654288/150‑1 (MQ=255) cTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAg < 2:426963/150‑1 (MQ=255) tGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAgg < 1:955015/150‑1 (MQ=255) cATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACg < 1:1042919/115‑1 (MQ=255) cATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACg > 2:1042919/1‑115 (MQ=255) ggCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACggg > 1:20436/1‑114 (MQ=255) ggCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACggg < 2:20436/114‑1 (MQ=255) ggCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATc > 2:754837/1‑150 (MQ=255) cACCCCGGACAGCGCCAGCACCGCGCACACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGaa > 1:399153/1‑150 (MQ=255) cgagatgatccttggtcagatccgcctgccgcgcaccctgttggggttggcggtgggcgGa < 1:1279840‑M2/2‑1 (MQ=255) cgagatgatccttggtcagatccgcctgccgcgcaccctgttggggttggcggtgggcgGa > 2:1279840‑M2/60‑61 (MQ=255) cccGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACAt > 1:977454/1‑150 (MQ=255) ccagACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGCTTCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGTGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACAtt < 2:1029597/147‑1 (MQ=255) gcCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCGTCGCTGCATCGGAAACGGGCAGCCCCAACAGGAGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTg > 1:602544/1‑150 (MQ=255) cACCGCGCCCACCGCCCTCACCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGTAGCCCCAACGGGAGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTgg < 1:1141586/150‑1 (MQ=255) gatccgcctgccgcgcaccctgttggggttggcggtgggcgGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAgg > 1:90527‑M2/42‑75 (MQ=255) gatccgcctgccgcgcaccctgttggggttggcggtgggcgGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAgg < 2:90527‑M2/34‑1 (MQ=255) aCCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGc < 2:293530/150‑1 (MQ=255) tcCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCg < 1:1279840‑M1/59‑1 (MQ=255) tcCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCg > 2:1279840‑M1/3‑61 (MQ=255) ccgcctgccgcgcaccctgttggggttggcggtgggcgGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGcccc > 2:89484‑M2/39‑150 (MQ=255) cgcctgccgcgcaccctgttggggttggcggtgggcgGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCCa > 1:708467‑M2/38‑150 (MQ=255) gcctgccgcgcaccctgttggggttggcggtgggcgGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCCAg > 2:572706‑M2/37‑150 (MQ=255) CCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCt < 2:530404‑M1/136‑1 (MQ=255) CCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGACTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCt > 1:530404‑M1/1‑136 (MQ=255) ccGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCCAGCGCCa < 2:399153/150‑1 (MQ=255) cGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCCAGCGCCAg > 2:1413137/1‑150 (MQ=255) gCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCCAGCGCCAGt < 1:633560/150‑1 (MQ=255) accctgttggggttggcggtgggcgGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCCAGCGCCAGTGACa < 1:572706‑M2/125‑1 (MQ=255) ccAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACgg > 1:906467/1‑72 (MQ=255) ccAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACgg < 2:906467/72‑1 (MQ=255) ggTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCCAGCGCCAGTGACAGCCAGATCGc > 2:711141/1‑150 (MQ=255) gcgGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCCAGCGCCAGTGACAGCCAGATCGCCAACa < 2:1392872/150‑1 (MQ=255) gGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCCAGCGCCAGTGACAGCCAGATCGCCAACAGGCAcagca < 2:602544‑M2/149‑1 (MQ=255) gGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCCAGCGCCAGTGACAGCCAGATCGCCAACAGGCAcagca > 1:1277599‑M2/2‑150 (MQ=255) gATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCCAGCGCCAGTGACAGCCAGATCGCCAACAGGCAcagcag > 1:991301/1‑150 (MQ=255) | ATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTCGGCCAGCGGGTTGCGGAACAGCCCCTGCATGGCCACCCCGGACAGCGCCAGCACCGCGCCCACCGCCAACCCCAACAGGGTGCGCGGCAGGCGGATCTG‑ACCAAGGATCATCTCGGCCTGCTGCAGGCCATCTTCGGAAACGGGCAGCCCCAACAGGCGCAGGCCAGCGCGCAGGGTATCGAACATTGGCAGGCTGACTGGCCCCAGCGCCAGTGACAGCCAGATCGCCAACAGGCACAGCAG > NC_002947/5328043‑5328341 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |