New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6030119 =	41 (0.780)	7 (0.140)	5/228	NT	16.3%	coding (9/261 nt)	PP_5729	hypothetical protein
	?	NC_002947	6030147 =	34 (0.700)					coding (37/261 nt)	PP_5729	hypothetical protein

GACCACCCGGGTGCGGCCGGTAAGGGTGCGGATGGTGTCTTTGAGCGCTGGCGCGTAAGGGGTGCCGACCAGGTGGGCGAGGGTTCGCAGCACTTCTTCGTTGGTCATGGTGTTCTTCCTGTTGAAGTTGGATGGCCCGACATGGGCAGGGCCATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6030275‑6030119 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccatccAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGCCGCACCCGGGTGGTCGGCCCCAACGAAATGTGCA  >  NC_002947/6030147‑6030294                                                                                                                                                                                                                                                                                                                   GACCACCCGGGTGCGGCCGGTAAGGGTGCGGATGGTGTCTTTGAGCGCTGGCGCGTAAGGGGTGCCGACCAGGTGGGCGAGGGTTCGCAGCACTTCTTCGTTGGTCATGGTGTTCTTCCTGTTGAAGTTGGATGGCCCGACATGGGCAGG                                                                                                                                                             >  1:560971/1‑150      gggtGGTGCGGCCGGTAAGGGTGCGGATGGTGTCTTTGAGCGCTGGCGCGTAAGGGGTGCCGACCAGGTGGGCGAGGGTTCGCAGCACTTCTTCGTTGGTCATGGTGTTCTTCCTGTTGAAGTTGGATGGCCCGACATGGGCAGGGC                                                                                                                                                           <  1:590959/143‑1      gggtGGTGCGGCCGGTAAGGGTGCGGATGGTGTCTTTGAGCGCTGGCGCGTAAGGGGTGCCGACCAGGTGGGCGAGGGTTCGCAGCACTTCTTCGTTGGTCATGGTGTTCTTCCTGTTGAAGTTGGATGGCCCGACATGGGCAGGGC                                                                                                                                                           >  2:590959/5‑147                GCCGGTAAGGGTGCGGATGGTGTCTTTGAGCGCTGGCGCGTAAGGGGTGCCGACCAGGTGGGCGAGGGTTCGCAGCACTTCTTCGTTGGTCATGGTGTTCTTCCTGTTGAAGTTGGATGGCCCGACATGGGCAGGG                                                                                                                                                            <  1:1296165/136‑1                GCCGGTAAGGGTGCGGATGGTGTCTTTGAGCGCTGGCGCGTAAGGGGTGCCGACCAGGTGGGCGAGGGTTCGCAGCACTTCTTCGTTGGTCATGGTGTTCTTCCTGTTGAAGTTGGATGGCCCGACATGGGCAGGG                                                                                                                                                            >  2:1296165/1‑136                                                                       AGGTGGGCGAGGGTTCGCAGCACTTCTTCGTTGGTCATGGTGTTCTTCCTGTTGAAGTTGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGA                                                                                                                                      <  1:403637/103‑1                                                                       AGGTGGGCGAGGGTTCGCAGCACTTCTTCGTTGGTCATGGTGTTCTTCCTGTTGAAGTTGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGA                                                                                                                                      >  2:403637/1‑103                                                                                                                                    ATGGCCCGACATGGGCAGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGCCG                                  >  1:954775/1‑142                                                                                                                                    ATGGCCCGACATGGGCAGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGCCG                                  <  2:954775/142‑1                                                                                                                                    ATGGCCCGACATGGGCAGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTC                                                                                                   <  1:665015/77‑1                                                                                                                                    ATGGCCCGACATGGGCAGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTC                                                                                                   >  2:665015/1‑77                                                                                                                                    ATGGCCCGACATGGACAGGGCCATCCAACTTCAAAAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGCCGCACCCGGG                          >  2:335987/1‑150                                                                                                                                                         CATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACATGGTCGTCACCCCTTACGCGCCAGCGCTCAAAGACACCACCCGCACCCTTACCGGACGCACCCGGGTGGTCGGCCCCAACGAAATGT     <  2:146432/150‑1                                                                                                                                                            CCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGCCGCACCCGGGTGGTCGGCCCCAACGAAATGTGCA  >  1:1213949/1‑150                                                                                                                                                            CCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGCCGCACCCGGGTGGTCGGCCCCAACGAAATGTGCA  <  1:769192/150‑1                                                                                                                                                                                                                                                                                                                   GACCACCCGGGTGCGGCCGGTAAGGGTGCGGATGGTGTCTTTGAGCGCTGGCGCGTAAGGGGTGCCGACCAGGTGGGCGAGGGTTCGCAGCACTTCTTCGTTGGTCATGGTGTTCTTCCTGTTGAAGTTGGATGGCCCGACATGGGCAGGGCCATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6030275‑6030119 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccatccAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGCCGCACCCGGGTGGTCGGCCCCAACGAAATGTGCA  >  NC_002947/6030147‑6030294

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.