| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6030119 = | 41 (0.780) | 7 (0.140) | 5/228 | NT | 16.3% | coding (9/261 nt) | PP_5729 | hypothetical protein |
| ? | NC_002947 | 6030147 = | 34 (0.700) | coding (37/261 nt) | PP_5729 | hypothetical protein | |||||
CCCGCCGGCTTCAAAGGCACTTGGGAGGTGCTGGAGCCTTGCCGCAAGATCTATGTGATGTTCGAGCAGAAGTAACCACAGCAGTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGCCGCACCCGGGTGGTCGGCCCCAACGAAATGTGCA > NC_002947/6029998‑6030294 | cccGCCGGCTTCAAAGGCACTTGGGAGGTGCTGGAGCCTTGCCGCAAGATCTATGTGATGTTCGAGCAGAAGTAACCACAGCAGTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCa > 1:768322/1‑150 (MQ=255) ccgccgGCTTCAAAGGCACTTGGGAGGTGCTGGAGCCTTGCCGCAAGATCTATGTGATGTTCGAGCAGAAGTAACCACAGCAGTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCaa < 1:406716/150‑1 (MQ=255) ccgccgGCTTCAAAGGCACTTGGGAGGTGCTGGAGCCTTGCCGCAAGATCTATGTGATGTTCGAGCAGAAGTAACCACAGCAGTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGAAGGCCCTGCCCATGTCGGGCCATCCaa > 1:332981/1‑150 (MQ=255) ttCAAAGGCACTTGGGAGGTGCTGGAGCCTTGCCGCAAGATCTATGTGATGTTCGAGCAGAAGTAACCACAGCAGTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACa < 2:1166417/150‑1 (MQ=255) aCTTGGGAGGTGCTGGAGCCTTGCCGCAAGATCTATGTGATGTTCGAGCAGAAGTAACCACAGCAGTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGgaagaa < 2:810750/148‑1 (MQ=255) aCTTGGGAGGTGCTGGAGCCTTGCCGCAAGATCTATGTGATGTTCGAGCAGAAGTAACCACAGCAGTATCTAGGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGgaagaa > 1:810750/1‑148 (MQ=255) gAGGTGCTGGAGCCTTGCCGCAAGATCTATGTGATGTTCGAGCAGAAGTAAGCACAGCAGTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGa < 2:860483/150‑1 (MQ=255) ggAGCCTTGCCGCAAGATCTATGTGATGTTCGAGCAGAAGTAACCACAGCAGTTTCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACgaa > 1:102457/1‑150 (MQ=255) gAGCCTTGCCGCAAGATCTATGTGATGTTCGAGCAGAAGTAACCACAGCAGTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACgaag < 2:768322/150‑1 (MQ=255) aGCCTTGCCGCAAGATCTATGTGATGTTCGAGCAGAAGTAACCACAGCAGTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCAATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACgaaga < 1:866473/150‑1 (MQ=255) gCCTTGCCGCAAGATCTATGTGATGTTCGAGCAGAAGTAACCACAGCAGTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACgaagaa < 1:826778/150‑1 (MQ=255) gCAAGATCTATGTGATGTTCGAGCAGAAGTAACCACAGCAGTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGtgctgc > 1:245404/1‑149 (MQ=255) gCAAGATCTATGTGATGTTCGAGCAGAAGTAACCACAGCAGTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGtgctgc < 2:245404/149‑1 (MQ=255) tgtgATGTTCGAGCAGAAGTAACCACAGCAGTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGTATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGcc > 1:810212/1‑150 (MQ=255) gATGTTCGAGCAGAAGTAACCACAGCAGTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGgaa > 2:1023431/1‑107 (MQ=255) gATGTTCGAGCAGAAGTAACCACAGCAGTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGgaa < 1:1023431/107‑1 (MQ=255) ttCGAGCAGAAGTAACCACAGCAGTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATAGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCATCGCCCACCTgg > 1:146432/1‑150 (MQ=255) aggtgggcgagggttcgcagcacttcttcgttggtcatggtgttcttcctgttgaagttggatggccctgcccatgtcgggccatccAACTTCAACAGgaaga < 1:403637‑M2/16‑1 (MQ=255) aggtgggcgagggttcgcagcacttcttcgttggtcatggtgttcttcctgttgaagttggatggccctgcccatgtcgggccatccAACTTCAACAGgaaga > 2:403637‑M2/88‑103 (MQ=255) cAGAAGTAACCACAGCAGTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCa < 2:846180/150‑1 (MQ=255) cacaGCAGTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAGGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTAcgc < 2:536674/150‑1 (MQ=255) cacaGCAGTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTAcgc > 1:164667/1‑150 (MQ=255) cagcagTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACgcgc > 2:769192/1‑150 (MQ=255) gcagTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCa > 1:1351248/1‑150 (MQ=255) tATCTATGTAGCGCAGGCAATTCGCAGGCATTCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAgcgc > 1:9182/1‑150 (MQ=255) tGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTAcg < 2:937753/135‑1 (MQ=255) tGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTAcg > 1:937753/1‑135 (MQ=255) aGCGCAGGCAATTCGCAGGCATGCGTGAGGAAGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGaca < 2:332981/150‑1 (MQ=255) cAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCAt > 1:697513/1‑150 (MQ=255) tcttcctgttgaagttGGATGGCCCGACATGGGCAGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCt < 1:403637‑M1/87‑1 (MQ=255) tcttcctgttgaagttGGATGGCCCGACATGGGCAGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCt > 2:403637‑M1/17‑103 (MQ=255) aGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTAc > 1:1103001/1‑150 (MQ=255) gCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCGACTTCAACAGGAAGAACACCATGACCAACGAAGAAGtgctgc > 2:823500/1‑81 (MQ=255) gCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGtgctgc < 1:823500/81‑1 (MQ=255) gCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGt > 1:734877/1‑100 (MQ=255) gCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGt < 2:734877/100‑1 (MQ=255) aTGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGc < 2:164667/150‑1 (MQ=255) atggcccgacatgggcagggccatccAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTc > 2:665015‑M2/27‑77 (MQ=255) atggcccgacatgggcagggccatccAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTc < 1:665015‑M2/51‑1 (MQ=255) atggcccgacatgggcagggccatccAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGCCg < 2:954775‑M2/116‑1 (MQ=255) atggcccgacatgggcagggccatccAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGCCg > 1:954775‑M2/27‑142 (MQ=255) atggcccgacatggacagggccatccAACTTCAAAAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGCCGCACCCggg > 2:335987‑M2/27‑150 (MQ=255) GCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGCcgcaccaccc < 1:590959‑M1/147‑5 (MQ=255) GCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGCcgcaccaccc > 2:590959‑M1/1‑143 (MQ=255) CCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGc > 2:1296165‑M1/1‑136 (MQ=255) CCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGc < 1:1296165‑M1/136‑1 (MQ=255) CCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGCCGCACCCGGGTGGTc > 1:560971‑M1/1‑150 (MQ=255) tGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGCCGCACCCGGGTGGTCgg < 2:810212/150‑1 (MQ=255) cccATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTc < 2:1313110/80‑1 (MQ=255) cccATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTc > 1:1313110/1‑80 (MQ=255) ccATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGCCGCACCCGGGTGGTCGGccc < 2:102457/150‑1 (MQ=255) catccAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACATGGTCGTCACCCCTTACGCGCCAGCGCTCAAAGACACCACCCGCACCCTTACCGGACGCACCCGGGTGGTCGGCCCCAACGAAAtgt < 2:146432‑M2/145‑1 (MQ=255) ccAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGCCGCACCCGGGTGGTCGGCCCCAACGAAATGTGCa > 1:1213949‑M2/3‑150 (MQ=255) ccAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGCCGCACCCGGGTGGTCGGCCCCAACGAAATGTGCa < 1:769192‑M2/148‑1 (MQ=255) | CCCGCCGGCTTCAAAGGCACTTGGGAGGTGCTGGAGCCTTGCCGCAAGATCTATGTGATGTTCGAGCAGAAGTAACCACAGCAGTATCTATGTAGCGCAGGCAATTCGCAGGCATGCGTGAGGATGGCCCTGCCCATGTCGGGCCATCCAACTTCAACAGGAAGAACACCATGACCAACGAAGAAGTGCTGCGAACCCTCGCCCACCTGGTCGGCACCCCTTACGCGCCAGCGCTCAAAGACACCATCCGCACCCTTACCGGCCGCACCCGGGTGGTCGGCCCCAACGAAATGTGCA > NC_002947/6029998‑6030294 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |