| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6152896 | 37 (0.700) | 5 (0.100) | 5/230 | NT | 13.4% | coding (421/489 nt) | PP_5738 | hypothetical protein |
| ? | NC_002947 | = 6152922 | 30 (0.610) | coding (447/489 nt) | PP_5738 | hypothetical protein | |||||
GTCGACTCTCACCCGGTTACGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6152743‑6152896‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggtcCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCAGGATTTGCCTTGATTCGATCGGAAAGTGTCTGCCCATCCGCATAGAGGCACACAATTACGTCTGGCGCGAGGTCATGCAACTGCGCTTTTGCAAATGGCGTCACCCTGAA < NC_002947/6152922‑6152779 GTCGACTCTCACCCGGTTACGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCC > 1:1014442/1‑150GTCGACTCTCACCCGGTTACGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCC < 1:913254/150‑1 TTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCCAGTTCACTTGCCTTCGGCAACGGGCGACCGGCAGGATTTGCCTTGA < 2:459154/150‑1 CTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCA < 1:1204687/113‑1 CTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCA > 2:1204687/1‑113 GACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCAGGATTTGCCTTGATTCGATC < 1:342201/124‑1 GACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCAGGATTTGCCTTGATTCGATC > 2:342201/1‑124 GACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGC < 1:1207028/65‑1 GACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGC > 2:1207028/1‑65 GCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCC < 1:24860/53‑1 GCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCC > 2:24860/1‑53 CCGGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCAGGATTTGCCTTGATTCGATCGGAAAGTGTCTGCCCATCCGCATAGAGGCACACAATTACGTCTGGCGCGAGGTCATGCAACTGCGCTTTTGCAAATGGCGTCACCCTGAA > 1:698953/1‑150 GTCGACTCTCACCCGGTTACGATCGAAACATTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6152743‑6152896‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggtcCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCAGGATTTGCCTTGATTCGATCGGAAAGTGTCTGCCCATCCGCATAGAGGCACACAATTACGTCTGGCGCGAGGTCATGCAACTGCGCTTTTGCAAATGGCGTCACCCTGAA < NC_002947/6152922‑6152779 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |