New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6152896	37 (0.700)	5 (0.100)	5/230	NT	13.4%	coding (421/489 nt)	PP_5738	hypothetical protein
	?	NC_002947	= 6152922	30 (0.610)					coding (447/489 nt)	PP_5738	hypothetical protein

TTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATCTCACTGGCCCGCTGTGTCGGCAACCGCGTCA  >  NC_002947/6152773‑6153065                                                                                                                                                      |                                                                                                                                                ttCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTg                                                                                                                                                 >  1:475021/1‑150 (MQ=255) ttCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTg                                                                                                                                                 <  2:1300032/150‑1 (MQ=255)       ttCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGgaccgg                                                                                                                                           >  1:698953‑M2/1‑144 (MQ=255)          aGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCAt                                                                                                                                        <  1:915614/150‑1 (MQ=255)                aCGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCAcc                                                                                                                                  <  2:475021/150‑1 (MQ=255)                      tttGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCaa                                                                                                                            <  1:1163809/150‑1 (MQ=255)                         gCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGc                                                                                                                         <  1:997442/150‑1 (MQ=255)                                  cAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACCCGAGCCGATCGAATCAAGGCAAACCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGcc                                                                                                                <  1:945920/150‑1 (MQ=255)                                      tGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGCGTTCGCACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGc                                                                                                            <  1:1155374/150‑1 (MQ=255)                                                cgcgCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGc                                                                                                  <  1:692228/150‑1 (MQ=255)                                                       gACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGATGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGcc                                                                                           <  1:687849/150‑1 (MQ=255)                                                                    gCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCCAATCATGCCGGTCGCCCGTTGCCGAAGGCAACTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGc                                                                              <  1:320202/150‑1 (MQ=255)                                                                             cGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTCAGCGTCCGCCCAACGCACCTTGCGTAAGTCAg                                                                     <  1:1321026/150‑1 (MQ=255)                                                                              ggATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTgta                                                                                                        <  1:507112/114‑1 (MQ=255)                                                                              ggATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTgta                                                                                                        >  2:507112/1‑114 (MQ=255)                                                                                    gCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCAcc                                                                                                                                  >  1:1335549/1‑82 (MQ=255)                                                                                    gCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCAcc                                                                                                                                  <  2:1335549/82‑1 (MQ=255)                                                                                       gACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATAccc                                                           >  1:1059567/1‑150 (MQ=255)                                                                                                 gATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGgaccggcaggatttgccttgattcgatcggaaagtgtctgcccatccgcatagaggcacacaattacgtc                                                                           <  1:342201‑M2/124‑71 (MQ=255)                                                                                                 gATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGgaccggcaggatttgccttgattcgatcggaaagtgtctgcccatccgcatagaggcacacaattacgtc                                                                           >  2:342201‑M2/1‑54 (MQ=255)                                                                                                 gATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCgg                                                 >  2:982576/1‑150 (MQ=255)                                                                                                        tCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGc                                                                   <  1:176474/125‑1 (MQ=255)                                                                                                        tCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGc                                                                   >  2:176474/1‑125 (MQ=255)                                                                                                        tCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAACTGgaccggcaggatttgccttgattcgatcggaaagtgtctgcccatccgcatagaggcacacaattacgtctggcgcgaggtcatgcaactgcgcttttgcaaa                                          <  2:459154‑M2/150‑104 (MQ=255)                                                                                                          aaGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTg                                        >  1:805813/1‑150 (MQ=255)                                                                                                           aGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGAAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGc                                       >  2:520613/1‑150 (MQ=255)                                                                                                             gCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGccc                                     >  2:1237989/1‑150 (MQ=255)                                                                                                              cAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTgta                                                                                                        >  2:1191318/1‑82 (MQ=255)                                                                                                              cAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTgta                                                                                                        <  1:1191318/82‑1 (MQ=255)                                                                                                                     tGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGgaccggcaggatttgccttgattcgatcggaaagtgtctgcccatccgcatagaggcacacaattacgtctggcgcgag                                                                  <  1:1204687‑M2/113‑80 (MQ=255)                                                                                                                     tGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGgaccggcaggatttgccttgattcgatcggaaagtgtctgcccatccgcatagaggcacacaattacgtctggcgcgag                                                                  >  2:1204687‑M2/1‑34 (MQ=255)                                                                                                                                 gTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGc                                                                   <  2:1175420/100‑1 (MQ=255)                                                                                                                                 gTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGc                                                                   >  1:1175420/1‑100 (MQ=255)                                                                                                                                     ccGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATCTCACTGGCCCGCTGTGTCgg             <  2:1059567/150‑1 (MQ=255)                                                                                                                                      cGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCAc                                                         >  1:1012611/1‑105 (MQ=255)                                                                                                                                      cGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCAc                                                         <  2:1012611/105‑1 (MQ=255)                                                                                                                                           gCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATCTCACTGGCCCGCTGTGTCGGCAACcg       <  2:805813/150‑1 (MQ=255)                                                                                                                                             aaGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATCTCACTGGCCCGCTGTGTCGGCAACcgcg     >  2:132472/1‑150 (MQ=255)                                                                                                                                                tGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATCTCACTGGCCCGCTGTGTCGGCAACCGCGTCa  >  1:345475/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                TTCGGTTTCAGGGTGACGCCATTTGCAAAAGCGCAGTTGCATGACCTCGCGCCAGACGTAATTGTGTGCCTCTATGCGGATGGGCAGACACTTTCCGATCGAATCAAGGCAAATCCTGCCGGTCGCCCGTTGCCGAAGGCAAGTGAGCTGGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATCTCACTGGCCCGCTGTGTCGGCAACCGCGTCA  >  NC_002947/6152773‑6153065

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.