New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	497681 =	52 (0.990)	6 (0.120)	6/236	NT	11.2%	coding (1550/2388 nt)	PP_0409	two‑component system sensor histidine kinase
	?	NC_002947	497744 =	45 (0.890)					coding (1613/2388 nt)	PP_0409	two‑component system sensor histidine kinase

GGAGCGTGACCCGGCCGAGGGCGATCTGGAGTTCCCCTATATCAGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACGGTGTAGTCTG  >  NC_002947/497532‑497828                                                                                                                                                      |                                                                                                                                                     ttcgcgcagctgctcctgggacttcgccagcgccagctcggcccgcttgccctgtgtgatgtcccagactacaccgtcccacactacctggccgttgcccagatgccgggcgctggccttgatatcggcccagcgctgttcgccctgccg                                                                                                                                                      <  2:220367‑M1/1‑1 (MQ=255)  tcgcgcagctgctcctgggacttcgccagcgccagctcggcccgcttgccctgtgtgatgtcccagactacaccgtcccacactacctggccgttgcccagatgccgggcgctggccttgatatcggcccagcgctgttcgccctgccgg                                                                                                                                                     >  2:1056620‑M1/149‑150 (MQ=255)  gAGCGTGACCCGGCCGAGGGCGATCTGGAGTTCCCCTATATCAGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAgg                                                                                                                                                     >  2:914997/1‑150 (MQ=255)   cgcgcagctgctcctgggacttcgccagcgccagctcggcccgcttgccctgtgtgatgtcccagactacaccgtcccacactacctggccgttgcccagatgccgggcgctggccttgatatcggcccagcgctgttcgccctgccggg                                                                                                                                                    >  2:167766‑M1/148‑150 (MQ=255)     cGTGACCCGGCCGAGGGCGATCTGGAGTTCCCCTATATCAGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTg                                                                                                                                                  >  1:281720/1‑150 (MQ=255)       tGACCCGGCCGAGGGCGATCTGGAGTTCCCCTATATCAGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCa                                                                                                                                                <  1:1223583/150‑1 (MQ=255)       tGACCCGGCCGAGGGCGATCTGGAGTTCCCCTATATCAGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCa                                                                                                                                                <  1:204869/150‑1 (MQ=255)                 gAGGGCGATCTGGAGTGCCCCTATATCAGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGAcctggcc                                                                                                                                      <  2:327310/150‑1 (MQ=255)                   gggCGATCTGGAGTTCCCCTATATCAGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGAcctgg                                                                                                                                        >  2:601024/1‑146 (MQ=255)                   gggCGATCTGGAGTTCCCCTATATCAGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGAcctgg                                                                                                                                        <  1:601024/146‑1 (MQ=255)                       gATCTGGAGTTCCCCTATATCAGTGAGGGTAGAGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACctggccctggcc                                                                                                                                <  2:596606/150‑1 (MQ=255)                         tCTGGAGTTCCCCTATATCAGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGTTGGGCCTGCGCAACCTGGTACACACCGTGGAGCTGGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAg                                                                                                                              >  1:1163941/1‑150 (MQ=255)                         tCTGGAGTTCCCCTATATCAGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAg                                                                                                                              >  1:1412694/1‑150 (MQ=255)                         tCTGGAGTTCCCCTATATCAGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCCTGCCAg                                                                                                                              >  2:568948/1‑150 (MQ=255)                                 tCCCCTATATCAGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCCTGCCAG‑GACCAgtc                                                                                                                     <  1:568948/150‑3 (MQ=255)                                        tatCAGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTc                                                                                                               >  2:136912/1‑150 (MQ=255)                                        tatCAGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTc                                                                                                               <  2:281720/150‑1 (MQ=255)                                           ccgcttgccctgtgtgatgtcccagactacaccgtcccacactacctggccgttgcccagatgccgggcgctggccttgatatcggcccagcgctgttcgccctgccgg                                                                                                                                                     >  2:1128176‑M1/108‑109 (MQ=255)                                           ccgcttgccctgtgtgatgtcccagactacaccgtcccacactacctggccgttgcccagatgccgggcgctggccttgatatcggcccagcgctgttcgccctgccgg                                                                                                                                                     <  1:1128176‑M1/2‑1 (MQ=255)                                           cAGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACCAGTC‑CTg                                                                                                           <  1:914997/150‑1 (MQ=255)                                            aGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTgg                                                                                                          >  1:832720/1‑150 (MQ=255)                                            aGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTgg                                                                                                          <  2:1412694/150‑1 (MQ=255)                                               gAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAg                                                                                                       <  1:280465/150‑1 (MQ=255)                                               gAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACAACAAGACGGGCACTTAGTAGCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAg                                                                                                       >  1:168879/1‑150 (MQ=255)                                                tgccctgtgtgatgtcccagactacaccgtcccacactacctggccgttgcccagatgccgggcgctggccttgatatcggcccagcgctgttcgccctgccGGGTG‑AGGATGCGCCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAggg                                                                                                     >  1:1141817‑M1/103‑150 (MQ=255)                                                 gggTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCTAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAAGGGGCAGGTCCGGGCCCTGGCCAGCGAGGAGGACTGGTA‑TTGGCAggg                                                                                                     >  2:945087/1‑150 (MQ=255)                                                  ggTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCCGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGTCCCTGCCAG‑GACCAGTCCTGGTCGCTGGccaggg                                                                                                    <  1:1182492/150‑6 (MQ=255)                                                   cctgtgtgatgtcccagactacaccgtcccacactacctggccgttgcccagatgccgggcgctggccttgatatcggcccagcgctgttcgccctgccGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGgc                                                                                                   <  1:236776‑M1/51‑1 (MQ=255)                                                       cGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCa                                                                                                                                                <  2:611033/102‑1 (MQ=255)                                                       cGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCa                                                                                                                                                >  1:611033/1‑102 (MQ=255)                                                       cGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCAt                                                                                               >  1:1254714/1‑150 (MQ=255)                                                       cGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCAt                                                                                               <  1:262835/150‑1 (MQ=255)                                                         tgatgtcccagactacaccgtcccacactacctggccgttgcccagatgccgggcgctggccttgatatcggcccagcgctgttcgccctgccGGGTGCAGGACCTGGTCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATcc                                                                                             >  1:844115‑M1/94‑150 (MQ=255)                                                         aGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATcc                                                                                             >  2:602270/1‑150 (MQ=255)                                                             tttGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCAc                                                                                         >  1:1306653/1‑150 (MQ=255)                                                                 gtggGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCgg                                                                                     >  1:1023683/1‑150 (MQ=255)                                                                     ctacaccgtcccacactacctggccgttgcccagatgccgggcgctggccttgatatcggcccagcgctgttcgccctgccGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAgg                                                                                 >  2:236776‑M1/82‑150 (MQ=255)                                                                      ttATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAggg                                                                                <  2:832720/150‑1 (MQ=255)                                                                              ccAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑Ct                                                                                                            >  1:467509/1‑114 (MQ=255)                                                                              ccAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑Ct                                                                                                            <  2:467509/114‑1 (MQ=255)                                                                                 gCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAActccaga                                                                     <  2:1163941/150‑7 (MQ=255)                                                                                    agaTCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACAGCGCTggg                                                                  >  2:1178698/1‑150 (MQ=255)                                                                                       tCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACt                                                                                                                   >  2:443540/1‑99 (MQ=255)                                                                                       tCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACt                                                                                                                   <  1:443540/99‑1 (MQ=255)                                                                                       tCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCCTGCCAG‑GACCAGTCCTGGTCGCTGGccagg                                                                                                     <  1:706438/112‑5 (MQ=25)                                                                                       tCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCCTGCCAG‑GACCAGTCCTGGTCGCTGGccagg                                                                                                     >  2:706438/1‑108 (MQ=25)                                                                                        ccAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACAGCGCTGGGCCGa                                                              <  1:136912/150‑1 (MQ=255)                                                                                         cAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTAGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACAGCGCTGGGCCGat                                                             >  1:25330/1‑150 (MQ=255)                                                                                            ccgttgcccagatgccgggcgctggccttgatatcggcccagcgctgttcgccctgccGGGTG‑AGGATGCGCCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAg                                                                                                       <  2:1081016‑M1/46‑1 (MQ=255)                                                                                            ccgttgcccagatgccgggcgctggccttgatatcggcccagcgctgttcgccctgccGGGTG‑AGGATGCGCCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAg                                                                                                       >  1:1081016‑M1/59‑104 (MQ=255)                                                                                               ccGCAGATGGGCCTGCGCAACCTGGTGTACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAG‑GACCAGTCCTGGTcgctg                                                                                                           >  1:669608/1‑94 (MQ=255)                                                                                               ccGCAGATGGGCCTGCGCAACCTGGTGTACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAG‑GACCAGTCCTGGTcgctg                                                                                                           <  2:669608/98‑5 (MQ=255)                                                                                               ccGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAg                                                       <  2:1254714/150‑1 (MQ=255)                                                                                               ccGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAg                                                       <  2:1392164/150‑1 (MQ=255)                                                                                                 gCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACa                                                                          >  1:1056554/1‑129 (MQ=255)                                                                                                 gCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACa                                                                          <  2:1056554/129‑1 (MQ=255)                                                                                                   aGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGCCCTGGCCAACGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCa                                                   <  1:602270/150‑1 (MQ=255)                                                                                                               gcAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATc                                       >  2:522007/1‑150 (MQ=255)                                                                                                                    cTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGc                                  >  1:90599/1‑150 (MQ=255)                                                                                                                           aCCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGcc                           >  2:897386/1‑150 (MQ=255)                                                                                                                            ccccGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCa                          >  2:248584/1‑150 (MQ=255)                                                                                                                            ccccGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCa                          >  2:1376161/1‑150 (MQ=255)                                                                                                                                      cGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTgg                >  1:1117582/1‑150 (MQ=255)                                                                                                                                        tGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACAGCGCTGGGCCGat                                                             >  2:1396067/1‑103 (MQ=255)                                                                                                                                        tGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACAGCGCTGGGCCGat                                                             <  1:1396067/103‑1 (MQ=255)                                                                                                                                                 tCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTg                                     <  1:652481/118‑1 (MQ=255)                                                                                                                                                 tCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTg                                     >  2:652481/1‑118 (MQ=255)                                                                                                                                                 tCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACGGTGTAGt     <  1:522007/150‑1 (MQ=255)                                                                                                                                                    caGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACGGTGTAGTCTg  <  1:1178698/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     GGAGCGTGACCCGGCCGAGGGCGATCTGGAGTTCCCCTATATCAGTGAGGGTAGCGAGGCTTTGGTGGGTTATGCACCCAGCGAGATCCAGCACCCGCAGATGGGCCTGCGCAACCTGGTGCACCCCGAGGACCGTGCTGATTATCACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTC‑CTGGCAGGGGCGCATCCTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACGGTGTAGTCTG  >  NC_002947/497532‑497828

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.