New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 660879 =52 (0.990)6 (0.120) 6/228 NT 11.4% intergenic (+8/‑159) speA/PP_0568 biosynthetic arginine decarboxylase/hypothetical protein
?NC_002947 660923 = 45 (0.920)intergenic (+52/‑115) speA/PP_0568 biosynthetic arginine decarboxylase/hypothetical protein

CTACGTGCACCTGTCGCCGGAAGAGTTGATGACGCATTACCGCGACAAGGTTGCCAGCGCCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCGGTAAATATCCGGCCCTGGTCCATCGCACCAATGCCGCTACCTTTGAATGCAATGTTCAAAG  >  NC_002947/660730‑661028
                                                                                                                                                     |                                                                                                                                                     
cTACGTGCACCTGTCGCCGGAAGAGTTGATGACGCATTACCGCGACAAGGTTGCCAGCGCCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTAGTGTTACCTGTCGTCGTAATTGACggg                                                                                                                                                       >  1:713851/1‑150 (MQ=255)
       taaacgatgggagcctggacgttgcatatcgtcctcctttgaacattgcattcaaaggtagcggcattggtgcgatggaccagggccggatatttaccggttgtgacgctggtgagggcttcgccctcatatcgcgacgcaaGGCCGCTc                                                                                                                                                <  2:591661‑M1/8‑1 (MQ=255)
        aaacgatgggagcctggacgttgcatatcgtcctcctttgaaccatcgaaaccattgtagcggcattggtgcgatggaccagggccggatatttaccggttgtgacgctggtgagggcttcgccctcatatcgcgacgcaaGGCCGCTcc                                                                                                                                               >  2:1107175‑M1/142‑150 (MQ=255)
        aCCTGTCGCCGGAATAGTTGATGACGCATTACCGCGACAAGGTTGCCAGCGCCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTcc                                                                                                                                               <  1:1064238/150‑1 (MQ=255)
           tGTCGCCGGAAGAGTTGATGACGCATTACCGCGACAAGGTTGCCAGCGCCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGc                                                                                                                                            <  2:758583/150‑1 (MQ=255)
                   aaaGCGTTGATGAAAAACTACCGCGACAAGGGTGCCATCGCCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCt                                                                                                                                    <  2:661882/149‑1 (MQ=255)
                       agTTGATGACGCATTACCGCGACAAGGTTGCCAGCGCCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGtgc                                                                                                                                <  1:502400/150‑1 (MQ=255)
                         ttGATGACGCATTACCGCGACAAGGTTGCCAGCGCCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCt                                                                                                                                              >  1:1281778/1‑134 (MQ=255)
                         ttGATGACGCATTACCGCGACAAGGTTGCCAGCGCCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCt                                                                                                                                              <  2:1281778/134‑1 (MQ=255)
                            atgaCGCATTACCGCGACAAGGTTGCCAGCGCCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCt                                                                                                                           >  2:1417838/1‑150 (MQ=255)
                             tgaCGCATTACCGCGACAAGGTTGCCAGCGCCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCtt                                                                                                                          <  1:1017822/150‑1 (MQ=255)
                              gaCGCATTACCGCGACAAGGTTGCCAGCGCCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCCCCTGCAAAAGCCTGTGCTGCCttt                                                                                                                         >  1:70437/1‑150 (MQ=255)
                                cGCATTACCGCGACAAGGTTGCCAGCGCCAAGACCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTtg                                                                                                                       <  1:307172/150‑1 (MQ=255)
                                 gCATTACCGCGACAAGGTTGCCAGCGCCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCtg                                                                                                                                   <  2:43144/137‑1 (MQ=255)
                                 gCATTACCGCGACAAGGTTGCCAGCGCCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCtg                                                                                                                                   >  1:43144/1‑137 (MQ=255)
                                 gCATTACCGCGACAAGGTTGCCAGCGCCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTtgt                                                                                                                      <  1:1072536/150‑1 (MQ=255)
                                 gCATTACCGCGACAAGGTTGCCAGCGCAAAGATCACTGCGCGTGAACGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGCCCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCTTGCAAAAGCCTGTGTTGCCTTAtgt                                                                                                                      >  2:1201602/1‑150 (MQ=255)
                                  atcgtcctcctttgaacattgcattcaaaggtagcggcattggtgcgatggaccagggccggatatttaccggttgtgacgctggtgagggcttcgccctcatatcgcgacgcaaGGCCGCTCCCACAAAAGCCTGTGCTGCCTTTtgt                                                                                                                      <  2:48852‑M1/34‑1 (MQ=255)
                                  atcgtcctcctttgaacattgcattcaaaggtagcggcattggtgcgatggaccagggccggatatttaccggttgtgacgctggtgagggcttcgccctcatatcgcgacgcaaGGCCGCTCCCACAAAAGCCTGTGCTGCCTTTtgt                                                                                                                      >  1:48852‑M1/116‑149 (MQ=255)
                                         tcctttgaacattgcattcaaaggtagcggcattggtgcgatggaccagggccggatatttaccggttgtgacgctggtgagggcttcgccctcatatcgcgacgcaaGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAg                                                                                                                 >  2:955985‑M1/109‑147 (MQ=255)
                                         tcctttgaacattgcattcaaaggtagcggcattggtgcgatggaccagggccggatatttaccggttgtgacgctggtgagggcttcgccctcatatcgcgacgcaaGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAg                                                                                                                 <  1:955985‑M1/39‑1 (MQ=255)
                                         tcctttgaacattgcattcaaaggtagcggcattggtgcgatggaccagggccggatatttaccggttgtgacgctggtgagggcttcgccctcatatcgcgacgcaaGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCgg                                                                                                              >  2:258955‑M1/109‑150 (MQ=255)
                                          cctttgaacattgcattcaaaggtagcggcattggtgcgatggaccagggccggatatttaccggttgtgacgctggtgagggcttcgccctcatatcgcgacgcaaGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGc                                                                                                             >  1:77257‑M1/108‑150 (MQ=255)
                                             cAAGGTTGCCAGCGCCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCtt                                                                                                          <  1:163467/150‑1 (MQ=255)
                                                ggTTGCCAGCGCCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCg                                                                                                       >  1:762709/1‑150 (MQ=255)
                                                 gTTGCCAGCGCCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGt                                                                                                      >  2:559412/1‑150 (MQ=255)
                                                     ccAGCGCCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTcgcg                                                                                                  >  1:1125394/1‑150 (MQ=255)
                                                      cAGCGCCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGa                                                                                                 <  1:1417838/150‑1 (MQ=255)
                                                         cgcCAAGATCACTGCGCGTGAGCGGCCCCAGTATCTGGATGCCTTGCGCCTGGGCTTGCCCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGatat                                                                                              <  1:1383539/150‑1 (MQ=255)
                                                         cgcCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGatat                                                                                              <  1:1201602/150‑1 (MQ=255)
                                                                aTCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCg                                                                                       >  2:943000/1‑150 (MQ=255)
                                                                 tCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGa                                                                                      >  1:893127/1‑150 (MQ=255)
                                                                  cACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGaa                                                                                     <  1:116551/150‑1 (MQ=255)
                                                                    cTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGc                                                                                   >  2:542781/1‑150 (MQ=255)
                                                                     tGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGTCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGcc                                                                                  >  1:155721/1‑150 (MQ=255)
                                                                                 gACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTc                                                                      >  1:1095134/1‑150 (MQ=255)
                                                                                      aGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAAc                                                                 <  2:762709/150‑1 (MQ=255)
                                                                                        tATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCg                                                               <  2:63618/150‑1 (MQ=255)
                                                                                        tATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGACTAAACGTCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCg                                                               >  1:88824/1‑150 (MQ=255)
                                                                                                    ttGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAggg                                                                                         <  2:874396/112‑1 (MQ=255)
                                                                                                    ttGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAggg                                                                                         >  1:874396/1‑112 (MQ=255)
                                                                                                         ccTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCGGTAAATATCCGGCCCTg                                              <  2:1095134/150‑1 (MQ=255)
                                                                                                          cTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTcgc                                                                                                   <  2:90304/96‑1 (MQ=255)
                                                                                                          cTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTcgc                                                                                                   >  1:90304/1‑96 (MQ=255)
                                                                                                          cTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGa                                                                                            >  1:44200/1‑103 (MQ=255)
                                                                                                          cTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGa                                                                                            <  2:44200/103‑1 (MQ=255)
                                                                                                          cTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCGGTAAATATCCGGcaatgg                                             <  2:1125394/150‑6 (MQ=255)
                                                                                                           gggtcTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCGGTAAATATCCGGCCCTGGt                                            <  2:713851/146‑1 (MQ=255)
                                                                                                                   aCCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCGGTa                                                            <  1:33043/126‑1 (MQ=255)
                                                                                                                   aCCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCGGTa                                                            >  2:33043/1‑126 (MQ=255)
                                                                                                                     ccGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTtgtg                                                                                                                     >  1:139932/1‑67 (MQ=255)
                                                                                                                     ccGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTtgtg                                                                                                                     <  2:139932/67‑1 (MQ=255)
                                                                                                                             cGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCGGTAAATATCCGGCCCTGGTCCATCGCACCAATGCCGc                          <  1:542781/150‑1 (MQ=255)
                                                                                                                                    gtcgtcGTAATTGACGGGGCCGCCCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCGGTAAATATCCGGCCCTGGTCCATCGCACCAATGCCGCTACCttt                   <  2:70437/150‑1 (MQ=255)
                                                                                                                                         cgtAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCGGTAAATATCCGGCCCTGGTCCATCGCACCAATGCCGCTACCTTTGAATg              <  1:559412/150‑1 (MQ=255)
                                                                                                                                            aaTTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCGGTAAATATCCGGCCCTGGTCCATCGCACCAATGCCGc                          <  1:391481/135‑1 (MQ=255)
                                                                                                                                            aaTTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCGGTAAATATCCGGCCCTGGTCCATCGCACCAATGCCGc                          >  2:391481/1‑135 (MQ=255)
                                                                                                                                            aaTTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCGGTAAATATCCGGCCCTGGTCCATCGCACCAATGCCGCTACCTTTGAATGCaa           <  2:88824/150‑1 (MQ=255)
                                                                                                                                            aaTTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCGGTAAATATCCGGCCCTGGTCCATCGCACCAATGCCGCTACCTTTGAATGCaa           <  1:922311/150‑1 (MQ=255)
                                                                                                                                              ttGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCGGTAAATATCCGGCCCTGGTCCATCGCACCAATGCCGCTACCTTTGAATGCAATg         <  1:943000/150‑1 (MQ=255)
                                                                                                                                              ttGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCGGTAAATATCCGGCCCTGGTCCATCGCACCAATGCCGCTACCTTTGAATGCAATg         >  1:591661/1‑150 (MQ=255)
                                                                                                                                                    gggCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCGGTAAATATCCGGCCCTCGTCCATCGCACCAATGCCGCTACCTTTGAATGCAATGTTCaaa   <  2:1033598/150‑1 (MQ=255)
                                                                                                                                                     GGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCGGTAAATATCCGGCCCTGGTCCATCGCACCAATGCCGCTACCTTTGAATGCAATGTTCAAag  <  2:672683‑M1/150‑1 (MQ=255)
                                                                                                                                                     GGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCGGTAAATATCCGGCCCTGGTCCATCGCACCAATGCCGCTACCTTTGAATGCAATGTTCAAag  >  2:893127‑M1/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CTACGTGCACCTGTCGCCGGAAGAGTTGATGACGCATTACCGCGACAAGGTTGCCAGCGCCAAGATCACTGCGCGTGAGCGGACCCAGTATCTGGATGCCTTGCGCCTGGGCTTGACCCGGTCTTCGTACCTGTCGTCGTAATTGACGGGGCCGCTCCTGCAAAAGCCTGTGCTGCCTTTTGTGGGAGCGGCCTTGCGTCGCGATATGAGGGCGAAGCCCTCACCAGCGTCACAACCGGTAAATATCCGGCCCTGGTCCATCGCACCAATGCCGCTACCTTTGAATGCAATGTTCAAAG  >  NC_002947/660730‑661028

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.