New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 728969	55 (1.050)	6 (0.120)	6/234	NT	10.2%	coding (455/963 nt)	rluD	23S rRNA pseudouridine(1911/1915/1917) synthase
	?	NC_002947	= 728995	53 (1.060)					coding (481/963 nt)	rluD	23S rRNA pseudouridine(1911/1915/1917) synthase

TGTGCACCCGGCGGCCGGGCATGCCAGCGGCACCCTGCTCAACGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCACGGCGGCATGCGCCAGCGCATGGCTGTAACCG  >  NC_002947/728820‑729118                                                                                                                                                       |                                                                                                                                                      tgtgCACCCGGCGGCCGGGCATGCCAGCGGCACCCTGCTCAACGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCA                                                                                                                                                       <  2:1026152‑M1/150‑1 (MQ=255)        ccGGCGGCCGGGCATGCCAGCGGCACCCTGCTCAACGCGCTGCTGCACCATGTGCCAGACATCGTCCACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAg                                                                                                                                                >  2:160527/1‑150 (MQ=255)        ccGGCGGCCGGGCATGCCAGCGGCACCCTGCTCAACGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAg                                                                                                                                                >  2:918647/1‑150 (MQ=255)                 gggCATGCCAGCGGCACCCTGCTCAACGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTg                                                                                                                                       <  1:358071/150‑1 (MQ=255)                 gggCATGCCAGCGGCACCCTGCTCAACGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTg                                                                                                                                       <  2:1163483/150‑1 (MQ=255)                  ggCATGCCAGCGGCACCCTGCTCAACGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTgg                                                                                                                                      >  1:1127443/1‑150 (MQ=255)                    cATGCCAGCGGCACCCTGCTCAACGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTc                                                                                                                                    <  2:1186164/150‑1 (MQ=255)                       gCCAGCGGCACCCTGCTCAACGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAtctgctcgaccagcttggtctg                                                                                                                                 >  2:1333309‑M1/1‑128 (MQ=255)                       gCCAGCGGCACCCTGCTCAACGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAg                                                                                                                                 <  1:203450/150‑1 (MQ=255)                        ccAGCGGCACCCTGCTCAACGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGc                                                                                                                                >  2:1177538/1‑150 (MQ=255)                            cGGCACCCTGCTCAACGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGAt                                                                                                                            >  1:160527‑M2/1‑149 (MQ=255)                                aCCCTGCTCAACGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGAtgcag                                                                                                                        >  1:945518‑M2/1‑145 (MQ=255)                                 cccTGCTCAACGCGCTGCTGCACCATGTACCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGAtgcagg                                                                                                                       <  1:604892‑M2/150‑7 (MQ=255)                                    tGCTCAACGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAtctgctcgaccagcttggtctgcgcctgcagggtc                                                                                                                    <  1:1333309‑M1/150‑36 (MQ=255)                                         aaCGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑CTGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAg                                                                                                               >  2:966133/1‑150 (MQ=255)                                         aaCGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAg                                                                                                               >  1:1345693/1‑150 (MQ=255)                                                         aTGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACg                                                                                               >  2:286450/1‑150 (MQ=255)                                                          tgtgCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGa                                                                                              <  1:918647/150‑1 (MQ=255)                                                              ccAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAtctgctcgaccagcttggtctgcgcctgcagggtctt                                                                                                                  >  1:1172145‑M1/1‑89 (MQ=255)                                                              ccAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAtctgctcgaccagcttggtctgcgcctgcagggtctt                                                                                                                  <  2:1172145‑M1/126‑38 (MQ=255)                                                              ccAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAg                                                                                                               >  1:24471/1‑129 (MQ=255)                                                              ccAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAg                                                                                                               <  2:24471/129‑1 (MQ=255)                                                              ccAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGc                                                                                          >  1:534745/1‑150 (MQ=255)                                                                       gTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGAtt                                                                                 <  1:286450/150‑1 (MQ=255)                                                                       gTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGAtt                                                                                 >  1:786238/1‑150 (MQ=255)                                                                       ctCAACGTGCCGCCCGTCGGTATCGTGCACCGCCTGGACAAGGACACCACAAGCCTGCCCGGCCGAGACCGTG‑GCCTTCAGGCGCAGATTAATCTGCCCGAGCAGATCGCGAAGTGGAAGGTCAGCCGCATCTACGAGTGCATCGTGAtt                                                                                 <  1:1033526/149‑1 (MQ=255)                                                                          aaCGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGc                                                                              >  2:942203/1‑150 (MQ=255)                                                                             gTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCgtg                                                                           <  2:1345693/150‑1 (MQ=255)                                                                              tGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCgtgg                                                                          <  1:914037/150‑1 (MQ=255)                                                                               gCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCCCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCgtggt                                                                         <  2:692548/150‑1 (MQ=255)                                                                                 cgcgcgCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGa                                                                       <  1:180224/150‑1 (MQ=255)                                                                                    gcgcCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCACGCCAGACCAGCCACATCTACTAGTTCATCGTGATTGGCGTGGTGACTg                                                                    >  1:1384465/1‑150 (MQ=255)                                                                                       ccGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCg                                                                 <  2:786238/150‑1 (MQ=255)                                                                                       ccGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCg                                                                 <  2:31032/150‑1 (MQ=255)                                                                                          gTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTg                                                              <  1:942203/150‑1 (MQ=255)                                                                                          gTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTg                                                              <  2:225510/150‑1 (MQ=255)                                                                                          gTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTg                                                              <  2:1265214/150‑1 (MQ=255)                                                                                             tCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCa                                                           >  2:261032/1‑150 (MQ=255)                                                                                               gggCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCaa                                                          <  2:1030368/147‑1 (MQ=255)                                                                                               gTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCaa                                                          >  1:1030368/1‑149 (MQ=255)                                                                                                   aCCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAg                                                                                                                                          >  1:689395/1‑65 (MQ=255)                                                                                                   aCCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAg                                                                                                                                          <  2:689395/65‑1 (MQ=255)                                                                                                   aCCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCg                                                     >  2:554256/1‑150 (MQ=255)                                                                                                     cGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCgtg                                                                           <  2:294022/126‑1 (MQ=255)                                                                                                     cGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCgtg                                                                           >  1:294022/1‑126 (MQ=255)                                                                                                       ccTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGAcgc                                                 <  1:722886/150‑1 (MQ=255)                                                                                                         tGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAg                                                                                                               <  1:33297/86‑1 (MQ=255)                                                                                                         tGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAg                                                                                                               >  2:33297/1‑86 (MQ=255)                                                                                                         tGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACgcgc                                               >  1:1039060/1‑150 (MQ=255)                                                                                                                ggACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCgtggt                                                                         >  1:457384/1‑117 (MQ=255)                                                                                                                ggACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCgtggt                                                                         <  2:457384/117‑1 (MQ=255)                                                                                                                  acacCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGgcc                                      <  2:1039060/150‑1 (MQ=255)                                                                                                                  acacCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGgcc                                      <  1:554256/150‑1 (MQ=255)                                                                                                                      caccGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCa                                  >  1:1299288/1‑150 (MQ=255)                                                                                                                               g‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGTTTCTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCACGGCGGCAt                         <  1:13563/150‑1 (MQ=255)                                                                                                                               g‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGt                                                               <  1:1061348/112‑1 (MQ=255)                                                                                                                               g‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGt                                                               >  2:1061348/1‑112 (MQ=255)                                                                                                                                  tggtggtggCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCACGGCGGCATgc                       >  1:150319/1‑150 (MQ=255)                                                                                                                                    gtggtggCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGGGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCACGGCGGCATgcgc                     >  1:1348741/1‑150 (MQ=255)                                                                                                                                     tggtggCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCACGGCGGCATGCGcc                    <  1:966133/150‑1 (MQ=255)                                                                                                                                           ccAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCACGGCGGCATGCGCCAGCGCa              >  2:898588/1‑150 (MQ=255)                                                                                                                                            cAAGACCCTGCAtctgctcgaccagcttggtctgcgcctgcagggtcttg                                                                                                                 >  2:1196706‑M1/1‑12 (MQ=255)                                                                                                                                            cAAGACCCTGCAtctgctcgaccagcttggtctgcgcctgcagggtcttg                                                                                                                 <  1:1196706‑M1/50‑39 (MQ=255)                                                                                                                                            cAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGAtgcagggtcttg                                                                                                                 >  2:1196706‑M2/1‑38 (MQ=255)                                                                                                                                            cAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGAtgcagggtcttg                                                                                                                 <  1:1196706‑M2/50‑13 (MQ=255)                                                                                                                                             aaGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGAtgcagggtcttggccaccaccatcaggccggtggtgtccttgtccaggcggtgcacgataccggcgcgcggcacgttgacgatgtctgg                                    >  1:1172145‑M2/1‑37 (MQ=255)                                                                                                                                             aaGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGAtgcagggtcttggccaccaccatcaggccggtggtgtccttgtccaggcggtgcacgataccggcgcgcggcacgttgacgatgtctgg                                    <  2:1172145‑M2/126‑90 (MQ=255)                                                                                                                                               gACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGAtgcagggtcttggccaccaccatcaggccggtggtgtccttgtccaggcggtgcacgataccggcgcgcggcacgttgacgatgtctggcacatggtgcagcagcgcgttgagca          <  1:1333309‑M2/150‑116 (MQ=255)                                                                                                                                               gACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTg                                                              >  1:692982/1‑98 (MQ=255)                                                                                                                                               gACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTg                                                              <  2:692982/98‑1 (MQ=255)                                                                                                                                                  ccTGCAtctgctcgaccagcttggtctgcgcctgcagggtcttggccaccaccatcaggccggtggtgtccttgtccaggcggtgcacgataccggcgcgcggcacgttgacgatgtctggtacatggtgcagcagcgcgttgagcaggg       <  1:604892‑M1/150‑145 (MQ=255)                                                                                                                                                   cTGCAtctgctcgaccagcttggtctgcgcctgcagggtcttggccaccaccatcaggccggtggtgtccttgtccaggcggtgcacgataccggcgcgcggcacgttgacgatgtctggcacatggtgcagcagcgcgttgagcagggt      >  1:945518‑M1/1‑5 (MQ=255)                                                                                                                                                       atctgctcgaccagcttggtctgcgcctgcagggtcttggccaccaccatcaggccggtggtgtccttgtccaggcggtgcacgataccggcgcgcggcacgttgacgatgtctggcacatggtgcagcagcgcgttgagcagggtgccg  >  1:160527‑M1/1‑1 (MQ=255)                                                                                                                                                       |                                                                                                                                                      TGTGCACCCGGCGGCCGGGCATGCCAGCGGCACCCTGCTCAACGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCACGGCGGCATGCGCCAGCGCATGGCTGTAACCG  >  NC_002947/728820‑729118

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.