New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 728969	55 (1.050)	6 (0.120)	6/234	NT	10.2%	coding (455/963 nt)	rluD	23S rRNA pseudouridine(1911/1915/1917) synthase
	?	NC_002947	= 728995	53 (1.060)					coding (481/963 nt)	rluD	23S rRNA pseudouridine(1911/1915/1917) synthase

CGGCACCCTGCTCAACGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCACGGCGGCATGCGCCAGCGCATGGCTGTAACCGACGGCGGCAAGC  >  NC_002947/728847‑729130                                                                                                                                                      |                                                                                                                                        cGGCACCCTGCTCAACGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGAt                                                                                                                                        >  1:160527‑M2/1‑149 (MQ=255)     aCCCTGCTCAACGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGAtgcag                                                                                                                                    >  1:945518‑M2/1‑145 (MQ=255)      cccTGCTCAACGCGCTGCTGCACCATGTACCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGAtgcagg                                                                                                                                   <  1:604892‑M2/150‑7 (MQ=255)              aaCGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑CTGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAg                                                                                                                           >  2:966133/1‑150 (MQ=255)              aaCGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAg                                                                                                                           >  1:1345693/1‑150 (MQ=255)                              aTGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACg                                                                                                           >  2:286450/1‑150 (MQ=255)                               tgtgCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGa                                                                                                          <  1:918647/150‑1 (MQ=255)                                   ccAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAg                                                                                                                           <  2:24471/129‑1 (MQ=255)                                   ccAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAg                                                                                                                           >  1:24471/1‑129 (MQ=255)                                   ccAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGc                                                                                                      >  1:534745/1‑150 (MQ=255)                                            gTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGAtt                                                                                             >  1:786238/1‑150 (MQ=255)                                            gTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGAtt                                                                                             <  1:286450/150‑1 (MQ=255)                                            ctCAACGTGCCGCCCGTCGGTATCGTGCACCGCCTGGACAAGGACACCACAAGCCTGCCCGGCCGAGACCGTG‑GCCTTCAGGCGCAGATTAATCTGCCCGAGCAGATCGCGAAGTGGAAGGTCAGCCGCATCTACGAGTGCATCGTGAtt                                                                                             <  1:1033526/149‑1 (MQ=255)                                               aaCGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGc                                                                                          >  2:942203/1‑150 (MQ=255)                                                  gTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCgtg                                                                                       <  2:1345693/150‑1 (MQ=255)                                                   tGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCgtgg                                                                                      <  1:914037/150‑1 (MQ=255)                                                    gCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCCCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCgtggt                                                                                     <  2:692548/150‑1 (MQ=255)                                                      cgcgcgCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGa                                                                                   <  1:180224/150‑1 (MQ=255)                                                         gcgcCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCACGCCAGACCAGCCACATCTACTAGTTCATCGTGATTGGCGTGGTGACTg                                                                                >  1:1384465/1‑150 (MQ=255)                                                            ccGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCg                                                                             <  2:31032/150‑1 (MQ=255)                                                            ccGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCg                                                                             <  2:786238/150‑1 (MQ=255)                                                               gTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTg                                                                          <  1:942203/150‑1 (MQ=255)                                                               gTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTg                                                                          <  2:1265214/150‑1 (MQ=255)                                                               gTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTg                                                                          <  2:225510/150‑1 (MQ=255)                                                                  tCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCa                                                                       >  2:261032/1‑150 (MQ=255)                                                                    gggCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCaa                                                                      <  2:1030368/147‑1 (MQ=255)                                                                    gTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCaa                                                                      >  1:1030368/1‑149 (MQ=255)                                                                        aCCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCg                                                                 >  2:554256/1‑150 (MQ=255)                                                                          cGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCgtg                                                                                       <  2:294022/126‑1 (MQ=255)                                                                          cGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCgtg                                                                                       >  1:294022/1‑126 (MQ=255)                                                                            ccTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGAcgc                                                             <  1:722886/150‑1 (MQ=255)                                                                              tGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAg                                                                                                                           <  1:33297/86‑1 (MQ=255)                                                                              tGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAg                                                                                                                           >  2:33297/1‑86 (MQ=255)                                                                              tGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACgcgc                                                           >  1:1039060/1‑150 (MQ=255)                                                                                     ggACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCgtggt                                                                                     <  2:457384/117‑1 (MQ=255)                                                                                     ggACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCgtggt                                                                                     >  1:457384/1‑117 (MQ=255)                                                                                       acacCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGgcc                                                  <  2:1039060/150‑1 (MQ=255)                                                                                       acacCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGgcc                                                  <  1:554256/150‑1 (MQ=255)                                                                                           caccGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCa                                              >  1:1299288/1‑150 (MQ=255)                                                                                                    g‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGTTTCTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCACGGCGGCAt                                     <  1:13563/150‑1 (MQ=255)                                                                                                    g‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGt                                                                           >  2:1061348/1‑112 (MQ=255)                                                                                                    g‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGt                                                                           <  1:1061348/112‑1 (MQ=255)                                                                                                       tggtggtggCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCACGGCGGCATgc                                   >  1:150319/1‑150 (MQ=255)                                                                                                         gtggtggCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGGGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCACGGCGGCATgcgc                                 >  1:1348741/1‑150 (MQ=255)                                                                                                          tggtggCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCACGGCGGCATGCGcc                                <  1:966133/150‑1 (MQ=255)                                                                                                                ccAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCACGGCGGCATGCGCCAGCGCa                          >  2:898588/1‑150 (MQ=255)                                                                                                                 cAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGAtgcagggtcttg                                                                                                                             <  1:1196706‑M2/50‑13 (MQ=255)                                                                                                                 cAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGAtgcagggtcttg                                                                                                                             >  2:1196706‑M2/1‑38 (MQ=255)                                                                                                                  aaGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGAtgcagggtcttggccaccaccatcaggccggtggtgtccttgtccaggcggtgcacgataccggcgcgcggcacgttgacgatgtctgg                                                <  2:1172145‑M2/126‑90 (MQ=255)                                                                                                                  aaGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGAtgcagggtcttggccaccaccatcaggccggtggtgtccttgtccaggcggtgcacgataccggcgcgcggcacgttgacgatgtctgg                                                >  1:1172145‑M2/1‑37 (MQ=255)                                                                                                                    gACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGAtgcagggtcttggccaccaccatcaggccggtggtgtccttgtccaggcggtgcacgataccggcgcgcggcacgttgacgatgtctggcacatggtgcagcagcgcgttgagca                      <  1:1333309‑M2/150‑116 (MQ=255)                                                                                                                    gACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTg                                                                          >  1:692982/1‑98 (MQ=255)                                                                                                                    gACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTg                                                                          <  2:692982/98‑1 (MQ=255)                                                                                                                                 cAGACCAAGCTGGTCGAGCAGAtgcagggtcttggccaccaccatcaggccggtggtgtccttgtccaggcggtgcacgataccggcgcgcggcacgttgacgatgtctggcacatggtgcagcagcgcgttgagcagggtgccgctggc         >  2:1333309‑M2/1‑22 (MQ=255)                                                                                                                                  aGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCgtggt                                                                                     <  2:160985/73‑1 (MQ=255)                                                                                                                                  aGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCgtggt                                                                                     >  1:160985/1‑73 (MQ=255)                                                                                                                                  aGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCACGGCGGCATGCGCCAGCGCATGGCTGTAACCGAcggcg        >  2:1192846/1‑150 (MQ=255)                                                                                                                                  aGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTAAGCCGCATCTACGAGTGAATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCACATCGGCCGCCACGGCGGCATGCGCCAGCGCATGGCTGTAACCGAcggcg        <  2:604892/150‑1 (MQ=255)                                                                                                                                      cAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCACGGCGGCATGCGCCAGCGCATGGCTGTAACCGACGGCGGCaa    >  2:648563/1‑150 (MQ=255)                                                                                                                                        aGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGACAAGATCGACGCGCCCATCGGCCGCCACGGCGGCATGCGCCAGCGCATGGCTGTAACCGACGGCGGCAAGc  >  1:246608/1‑150 (MQ=255)                                                                                                                                                gAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCACGGCGGCATGCGCCAGCGCATGGCTGTAACCGACGGCGGCaa    >  1:737889/1‑140 (MQ=255)                                                                                                                                                gAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCACGGCGGCATGCGCCAGCGCATGGCTGTAACCGACGGCGGCaa    <  2:737889/140‑1 (MQ=255)                                                                                                                                                      aTGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCACGGCGGCATGCGCCAGCGCATTGCTGTAACCGAcgg          <  2:59867/128‑1 (MQ=255)                                                                                                                                                      aTGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCACGGCGGCATGCGCCAGCGCATGGCTGTAACCGAcgg          >  1:59867/1‑128 (MQ=255)                                                                                                                                                      |                                                                                                                                        CGGCACCCTGCTCAACGCGCTGCTGCACCATGTGCCAGACATCGTCAACGTGCCGCGCGCCGGTATCGTGCACCGCCTGGACAAGGACACCACCGGCCTG‑ATGGTGGTGGCCAAGACCCTGCAGGCGCAGACCAAGCTGGTCGAGCAGATGCAGGCCCGCAAGGTCAGCCGCATCTACGAGTGCATCGTGATTGGCGTGGTGACTGCCGGTGGCAAGATCGACGCGCCCATCGGCCGCCACGGCGGCATGCGCCAGCGCATGGCTGTAACCGACGGCGGCAAGC  >  NC_002947/728847‑729130

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.