New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 856608	57 (1.080)	4 (0.080)	4/222	NT	7.1%	intergenic (+35/+81)	pagL‑I/PP_0738	lipid A 3‑O‑deacylase/hypothetical protein
	?	NC_002947	= 856642	54 (1.140)					intergenic (+69/+47)	pagL‑I/PP_0738	lipid A 3‑O‑deacylase/hypothetical protein

CTTTGCCGGCGGGCATGAGATTGGGGTGCGGGCGATTCACTATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGAGG  >  NC_002947/856459‑856757                                                                                                                                                      |                                                                                                                                                      cTTTGCCGGCGGGCATGAGATTGGGGTGCGGGCGATTCACTATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGC                                                                                                                                                       >  2:286514‑M1/1‑150 (MQ=255)    tGCCGGCGGGCATGAGATTGGGGTGCGGGCGATTCACTATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCgg                                                                                                                                                    <  1:20178/150‑1 (MQ=255)      ccGGCGGGCATGAGATTGGGGTGCGGGCGATTCACTATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGaa                                                                                                                                                  <  1:286514/150‑1 (MQ=255)      ccGGCGGGCATGAGATTGGGGTGCGGGCGATTCACTATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGaa                                                                                                                                                  <  2:1340552/150‑1 (MQ=255)           gggCATGAGATTGGGGTGCGGGCGATTCACTATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACca                                                                                                                                             <  2:446593/150‑1 (MQ=255)             gCATGAGATTGGGGTGCGGGCGATTCACTATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACcaca                                                                                                                                           >  2:1169995/1‑150 (MQ=255)                 gagaTTGGGGTGCGGGCGATTCACTATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCAt                                                                                                                                       >  2:928446/1‑150 (MQ=255)                        gggTGCGGGCGATTCACTATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGCATACCACAGCATTAAAGGt                                                                                                                                >  1:300597/1‑150 (MQ=255)                         ggTGCGGGCGATTCACTATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCCCAGCATTAAAGGTc                                                                                                                               >  1:665430/1‑150 (MQ=255)                          gTGCGGGCGATTCACTATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCt                                                                                                                              <  1:477819/150‑1 (MQ=255)                            gCGGGCGATTCACTATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTACAAAGCTCCAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTgg                                                                                                                            <  2:161446/150‑1 (MQ=255)                                  gcttCACTCTTCCAACGCCGGCCTCAAACAGCCCAACGATGGTGCACAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCATCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATc                                                                                                                      <  1:505952/148‑1 (MQ=255)                                   aTTCACTATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCt                                                                                                                     >  1:187983/1‑150 (MQ=255)                                    ttCACTATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTg                                                                                                                    <  2:246008‑M2/150‑2 (MQ=255)                                     tCACTATTCCAACGCCGGCATAAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTgc                                                                                                                   >  1:834608‑M2/1‑148 (MQ=255)                                         tATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCt                                                                                                                              >  1:638274/1‑135 (MQ=255)                                         tATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCt                                                                                                                              <  2:638274/135‑1 (MQ=255)                                         tATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTaa                                                                                                                        >  2:141358/1‑141 (MQ=255)                                         tATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTaa                                                                                                                        <  1:141358/141‑1 (MQ=255)                                           ttCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTg                                                                                                                             >  2:420857/1‑134 (MQ=255)                                           ttCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTg                                                                                                                             <  1:420857/134‑1 (MQ=255)                                               aaCGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCagattacccagacctttaatgctgtggtattccggcaggagcgg                                                                                                           <  1:218236‑M1/148‑45 (MQ=255)                                               aaCGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCagattacccagacctttaatgctgtggtattccggcaggagcgg                                                                                                           >  2:218236‑M1/1‑104 (MQ=255)                                                    cGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTaaa                                                                                                                                   >  2:1346512/1‑119 (MQ=255)                                                    cGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTaaa                                                                                                                                   <  1:1346512/119‑1 (MQ=255)                                                              gagCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGaagaag                                                                                          <  1:1196710/150‑1 (MQ=255)                                                                  ccAACGATGGTGTAGAAAGCTGCAGCCTGCATTACAGAATGGGGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCAATAAAGGTCTGGGTAATGTGCAGGAGCGGGCTTAACAGCGAAGCAGGTaa                                                                                      >  2:388939/1‑150 (MQ=255)                                                                  ccAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTaa                                                                                      <  2:187983/150‑1 (MQ=255)                                                                      agATGGTGTAAGAAACTCGAGCGTGCAGGACAGAAAAGCGCGCTAAATTCACCTGCATTCGCGGGCAATGCCCGCTTTTGCTGTTATACCAGTGGAGTATTGCTCTGGGTAATCTGCAGGGGCGGGCTTGCCCGCGAAGAATGTAATggt                                                                                  <  2:50104/149‑3 (MQ=255)                                                                        aTGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGa                                                                                <  2:1279045/150‑1 (MQ=255)                                                                         tGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGAt                                                                               >  1:1303244/1‑150 (MQ=255)                                                                               aGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAAt                                                                                     >  2:412874/1‑138 (MQ=255)                                                                               aGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAAt                                                                                     <  1:412874/138‑1 (MQ=255)                                                                                     cTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCaa                                                                   >  1:274611/1‑150 (MQ=255)                                                                                      tACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCg                                                                                                                                                     >  1:955864/1‑67 (MQ=255)                                                                                      tACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCg                                                                                                                                                     <  2:955864/67‑1 (MQ=255)                                                                                      tACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCACCTGCCGGAATACCACAGCAGTAAGGGCCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAAc                                                                  >  1:882098/1‑150 (MQ=255)                                                                                           ccTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCagattacccagacctttaatgctgtggtattccggca                                                                                                                  <  2:785775‑M1/97‑38 (MQ=255)                                                                                           ccTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCagattacccagacctttaatgctgtggtattccggca                                                                                                                  >  1:785775‑M1/1‑60 (MQ=255)                                                                                           ccTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCTGGAATACCACAGCATTAAAGGGCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCCGATTTTACCGGTCAACGCGcc                                                             >  1:427205/1‑150 (MQ=255)                                                                                           ccTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGcc                                                             >  1:1047566/1‑150 (MQ=255)                                                                                            cTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTCCATGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCa                                                            <  1:1169995/150‑1 (MQ=255)                                                                                               cATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCg                                                         >  2:6951/1‑150 (MQ=255)                                                                                                       aaTGGCGCTCTGCATTCACCTGCATTCGCGGGTCATGCCCGATGCTGCCGCAATACCAGAGCATGAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAgg                                                 <  2:665430/150‑1 (MQ=255)                                                                                                              ctctGAATTCACCTGCATTCGGTGGCAATGCCCGCTACTGCCGGAATACCACAGCATTAAAGGACTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAATAAGGTAATGCTGATTTCAGCGGCCAACGCGCCAGCGGCCACAGGCTACTaa                                          <  2:22071/150‑1 (MQ=255)                                                                                                               tctGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCcgc                                                                                                 <  2:726804/94‑1 (MQ=255)                                                                                                               tctGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCcgc                                                                                                 >  1:726804/1‑94 (MQ=255)                                                                                                                 tGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGt                                       <  1:928446/150‑1 (MQ=255)                                                                                                                    aTTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCa                                    <  2:274611/150‑1 (MQ=255)                                                                                                                    aTTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCa                                    <  1:355114/150‑1 (MQ=255)                                                                                                                          cTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCg                                                         <  1:1411805/123‑1 (MQ=255)                                                                                                                          cTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCg                                                         >  2:1411805/1‑123 (MQ=255)                                                                                                                          cTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGtct                              >  2:1113653/1‑150 (MQ=255)                                                                                                                          cTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGtct                              >  1:1166782/1‑150 (MQ=255)                                                                                                                           tGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGCGCGGGGATGTCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGtctc                             <  2:48848/150‑1 (MQ=255)                                                                                                                              aggagcgGGCATTGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAg                          >  1:178450/5‑150 (MQ=255)                                                                                                                              aTTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAg                          >  1:609615/1‑150 (MQ=255)                                                                                                                              aTTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAg                          <  2:609615/150‑1 (MQ=255)                                                                                                                                gagcgGGCATTGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGc                                                                         >  2:1004379/3‑101 (MQ=255)                                                                                                                                gagcgGGCATTGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGc                                                                         <  1:1004379/99‑1 (MQ=255)                                                                                                                                ccgcgAGCAATGCCCGCTCGTGCCGGAATACCACAGCATTCAAGGTCTGGATAATCTGCAGCAGAGCGCTTGGCCGGGAAGAACGTAATGCGTAGTTCAGCGGTCATCGCGCCAGCGGCCACAGACTACTAAGGTCCAGCGTCTCCAGGa                        <  2:427205/149‑1 (MQ=255)                                                                                                                                      gCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGtt                  >  2:1343583/1‑150 (MQ=255)                                                                                                                                       cAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTc                 <  1:1199977/150‑1 (MQ=255)                                                                                                                                       cAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTc                 >  2:1199977/1‑150 (MQ=255)                                                                                                                                        aaTGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTcc                >  2:676635/1‑150 (MQ=255)                                                                                                                                        aaTGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTcc                >  2:1400138/1‑150 (MQ=255)                                                                                                                                          tGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCgg              <  1:676635/150‑1 (MQ=255)                                                                                                                                             ccGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTgcaggagcgggcattgcccgcgaatgcaggtgaattcagagcgccattctgtaatgcaggctgtagctttctacaccatcgttgggctctttgatgccggcgtt             >  2:218236‑M2/1‑44 (MQ=255)                                                                                                                                             ccGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTgcaggagcgggcattgcccgcgaatgcaggtgaattcagagcgccattctgtaatgcaggctgtagctttctacaccatcgttgggctctttgatgccggcgtt             <  1:218236‑M2/148‑105 (MQ=255)                                                                                                                                               gCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTtctc         <  2:1047566/150‑1 (MQ=255)                                                                                                                                                 tCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTtctctc       <  2:1767/150‑1 (MQ=255)                                                                                                                                                    tGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTgcaggagcgggcattgcccgcgaatgcaggtgaattcagagcgccattctgtaatgcagg                                                         <  2:785775‑M2/97‑61 (MQ=255)                                                                                                                                                    tGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTgcaggagcgggcattgcccgcgaatgcaggtgaattcagagcgccattctgtaatgcagg                                                         >  1:785775‑M2/1‑37 (MQ=255)                                                                                                                                                    tGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGa    >  1:985701/1‑150 (MQ=255)                                                                                                                                                    tGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGa    >  1:275975/1‑150 (MQ=255)                                                                                                                                                     gCagattacccagacctttaatgctgtggtattccggcaggagcgggcattgcccgcgaatgcaggtgaattcagagcgccattctgtaatgcaggctgtagctttctacaccatcgttgggctcttttatgccggcgttggaatagtga   >  1:834608‑M1/1‑2 (MQ=255)                                                                                                                                                     gCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGAg   <  2:1166782/150‑1 (MQ=255)                                                                                                                                                     gCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGAg   <  2:985701/150‑1 (MQ=255)                                                                                                                                                      cagattacccagacctttaatgctgtggtattccggcaggagcgggcattgcccgcgaatgcaggtgaattcagagcgccattctgtaatgcaggctgtagctttctacaccatcgttgggctctttgatgccggcgttggaatagtgaa  <  2:246008‑M1/150‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                      CTTTGCCGGCGGGCATGAGATTGGGGTGCGGGCGATTCACTATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGAGG  >  NC_002947/856459‑856757

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.