New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 856608	57 (1.080)	4 (0.080)	4/222	NT	7.1%	intergenic (+35/+81)	pagL‑I/PP_0738	lipid A 3‑O‑deacylase/hypothetical protein
	?	NC_002947	= 856642	54 (1.140)					intergenic (+69/+47)	pagL‑I/PP_0738	lipid A 3‑O‑deacylase/hypothetical protein

ATTCACTATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGAGGCCACCGGCGCAGCAACTCCTCTGCGGCA  >  NC_002947/856493‑856785                                                                                                                                                      |                                                                                                                                                aTTCACTATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCt                                                                                                                                                 >  1:187983/1‑150 (MQ=255)  ttCACTATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTg                                                                                                                                                <  2:246008‑M2/150‑2 (MQ=255)   tCACTATTCCAACGCCGGCATAAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTgc                                                                                                                                               >  1:834608‑M2/1‑148 (MQ=255)                            gagCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGaagaag                                                                                                                      <  1:1196710/150‑1 (MQ=255)                                ccAACGATGGTGTAGAAAGCTGCAGCCTGCATTACAGAATGGGGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCAATAAAGGTCTGGGTAATGTGCAGGAGCGGGCTTAACAGCGAAGCAGGTaa                                                                                                                  >  2:388939/1‑150 (MQ=255)                                ccAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTaa                                                                                                                  <  2:187983/150‑1 (MQ=255)                                    agATGGTGTAAGAAACTCGAGCGTGCAGGACAGAAAAGCGCGCTAAATTCACCTGCATTCGCGGGCAATGCCCGCTTTTGCTGTTATACCAGTGGAGTATTGCTCTGGGTAATCTGCAGGGGCGGGCTTGCCCGCGAAGAATGTAATggt                                                                                                              <  2:50104/149‑3 (MQ=255)                                      aTGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGa                                                                                                            <  2:1279045/150‑1 (MQ=255)                                       tGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGAt                                                                                                           >  1:1303244/1‑150 (MQ=255)                                             aGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAAt                                                                                                                 <  1:412874/138‑1 (MQ=255)                                             aGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAAt                                                                                                                 >  2:412874/1‑138 (MQ=255)                                                   cTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCaa                                                                                               >  1:274611/1‑150 (MQ=255)                                                    tACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCACCTGCCGGAATACCACAGCAGTAAGGGCCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAAc                                                                                              >  1:882098/1‑150 (MQ=255)                                                         ccTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCTGGAATACCACAGCATTAAAGGGCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCCGATTTTACCGGTCAACGCGcc                                                                                         >  1:427205/1‑150 (MQ=255)                                                         ccTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGcc                                                                                         >  1:1047566/1‑150 (MQ=255)                                                          cTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTCCATGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCa                                                                                        <  1:1169995/150‑1 (MQ=255)                                                             cATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCg                                                                                     >  2:6951/1‑150 (MQ=255)                                                                     aaTGGCGCTCTGCATTCACCTGCATTCGCGGGTCATGCCCGATGCTGCCGCAATACCAGAGCATGAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAgg                                                                             <  2:665430/150‑1 (MQ=255)                                                                            ctctGAATTCACCTGCATTCGGTGGCAATGCCCGCTACTGCCGGAATACCACAGCATTAAAGGACTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAATAAGGTAATGCTGATTTCAGCGGCCAACGCGCCAGCGGCCACAGGCTACTaa                                                                      <  2:22071/150‑1 (MQ=255)                                                                             tctGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCcgc                                                                                                                             >  1:726804/1‑94 (MQ=255)                                                                             tctGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCcgc                                                                                                                             <  2:726804/94‑1 (MQ=255)                                                                               tGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGt                                                                   <  1:928446/150‑1 (MQ=255)                                                                                  aTTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCa                                                                <  1:355114/150‑1 (MQ=255)                                                                                  aTTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCa                                                                <  2:274611/150‑1 (MQ=255)                                                                                        cTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCg                                                                                     >  2:1411805/1‑123 (MQ=255)                                                                                        cTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCg                                                                                     <  1:1411805/123‑1 (MQ=255)                                                                                        cTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGtct                                                          >  2:1113653/1‑150 (MQ=255)                                                                                        cTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGtct                                                          >  1:1166782/1‑150 (MQ=255)                                                                                         tGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGCGCGGGGATGTCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGtctc                                                         <  2:48848/150‑1 (MQ=255)                                                                                            aggagcgGGCATTGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAg                                                      >  1:178450/5‑150 (MQ=255)                                                                                            aTTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAg                                                      >  1:609615/1‑150 (MQ=255)                                                                                            aTTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAg                                                      <  2:609615/150‑1 (MQ=255)                                                                                              gagcgGGCATTGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGc                                                                                                     >  2:1004379/3‑101 (MQ=255)                                                                                              gagcgGGCATTGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGc                                                                                                     <  1:1004379/99‑1 (MQ=255)                                                                                              ccgcgAGCAATGCCCGCTCGTGCCGGAATACCACAGCATTCAAGGTCTGGATAATCTGCAGCAGAGCGCTTGGCCGGGAAGAACGTAATGCGTAGTTCAGCGGTCATCGCGCCAGCGGCCACAGACTACTAAGGTCCAGCGTCTCCAGGa                                                    <  2:427205/149‑1 (MQ=255)                                                                                                    gCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGtt                                              >  2:1343583/1‑150 (MQ=255)                                                                                                     cAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTc                                             >  2:1199977/1‑150 (MQ=255)                                                                                                     cAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTc                                             <  1:1199977/150‑1 (MQ=255)                                                                                                      aaTGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTcc                                            >  2:1400138/1‑150 (MQ=255)                                                                                                      aaTGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTcc                                            >  2:676635/1‑150 (MQ=255)                                                                                                        tGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCgg                                          <  1:676635/150‑1 (MQ=255)                                                                                                           ccGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTgcaggagcgggcattgcccgcgaatgcaggtgaattcagagcgccattctgtaatgcaggctgtagctttctacaccatcgttgggctctttgatgccggcgtt                                         <  1:218236‑M2/148‑105 (MQ=255)                                                                                                           ccGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTgcaggagcgggcattgcccgcgaatgcaggtgaattcagagcgccattctgtaatgcaggctgtagctttctacaccatcgttgggctctttgatgccggcgtt                                         >  2:218236‑M2/1‑44 (MQ=255)                                                                                                             gCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTtctc                                     <  2:1047566/150‑1 (MQ=255)                                                                                                               tCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTtctctc                                   <  2:1767/150‑1 (MQ=255)                                                                                                                  tGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTgcaggagcgggcattgcccgcgaatgcaggtgaattcagagcgccattctgtaatgcagg                                                                                     <  2:785775‑M2/97‑61 (MQ=255)                                                                                                                  tGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTgcaggagcgggcattgcccgcgaatgcaggtgaattcagagcgccattctgtaatgcagg                                                                                     >  1:785775‑M2/1‑37 (MQ=255)                                                                                                                  tGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGa                                >  1:985701/1‑150 (MQ=255)                                                                                                                  tGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGa                                >  1:275975/1‑150 (MQ=255)                                                                                                                   gCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGAg                               <  2:985701/150‑1 (MQ=255)                                                                                                                   gCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGAg                               <  2:1166782/150‑1 (MQ=255)                                                                                                                         aTACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGAGGCCAcc                         >  1:1402636/1‑150 (MQ=255)                                                                                                                            ccACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGAGGCCACCGgc                      <  2:1303244/150‑1 (MQ=255)                                                                                                                             cacaGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGAGGCCACAGGCTACTAACTGCTGGCGTCCTCAGGACCAGTTCCGGTTCTCTCTGAGGCCACCGgcg                     >  2:312066/1‑150 (MQ=255)                                                                                                                              acaGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGAGGCCACCGgcgc                    >  1:179964/1‑150 (MQ=255)                                                                                                                              acaGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGAGGCCACCGgcgc                    >  1:464376/1‑150 (MQ=255)                                                                                                                                   aTTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGAGGCCACCGGCGCAGCaa               <  1:300309/150‑1 (MQ=255)                                                                                                                                   aTTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGAGGCCACCGGCGCAGCaa               <  1:1343583/150‑1 (MQ=255)                                                                                                                                              gggTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGAGGCCACCGGCGCAGCAACTCCTCTGCgg    >  1:297924/1‑150 (MQ=255)                                                                                                                                                gTAATCTGCCGGCGCAAGCTTGCCCGCCAAGACGTCAATACGGAGCTTATCGGTGAACGCGCCAGCTGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGAGGCCACCGGCGCAGCAACTCCTCTGCGGCa  >  2:375163/1‑150 (MQ=255)                                                                                                                                                gTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGAGGCCACCGGCGCAGCAACTCCTCTGCGGCa  >  2:881876/1‑150 (MQ=255)                                                                                                                                                  aaTCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAgg                                                     <  2:753644/97‑1 (MQ=255)                                                                                                                                                  aaTCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAgg                                                     >  1:753644/1‑97 (MQ=255)                                                                                                                                                      |                                                                                                                                                ATTCACTATTCCAACGCCGGCATCAAAGAGCCCAACGATGGTGTAGAAAGCTACAGCCTGCATTACAGAATGGCGCTCTGAATTCACCTGCATTCGCGGGCAATGCCCGCTCCTGCCGGAATACCACAGCATTAAAGGTCTGGGTAATCTGCAGGAGCGGGCTTGCCCGCGAAGAAGGTAATGCTGATTTCAGCGGTCAACGCGCCAGCGGCCACAGGCTACTAAGGTCCAGCGTCTCCAGGACCAGTTCCGGTTCTCTCTGAGGCCACCGGCGCAGCAACTCCTCTGCGGCA  >  NC_002947/856493‑856785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.