New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1285024	60 (1.140)	10 (0.190)	10/244	NT	15.0%	coding (249/795 nt)	PP_1122	OmpA family protein
	?	NC_002947	= 1285063	54 (1.040)					coding (288/795 nt)	PP_1122	OmpA family protein

TGGCTGCCAGCCTGCTCACGGGCTGCGCTACGCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCAACACGGCGGTTGACCACATGGGCTGCC  >  NC_002947/1284888‑1285172                                                                                                                                         |                                                                                                                                                     tggCTGCCAGCCTGCTCACGGGCTGCGCTACGCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGgtggtg                                                                                                                                         <  1:584398/150‑1 (MQ=255) tggCTGCCAGCCTGCTCACGGGCTGCGCTACGCACAGCGATGGCAGCGCGCCCCCCCAGTAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGgtggtg                                                                                                                                         <  1:1086198/150‑1 (MQ=255)     tGCCAGCCTGCTCACGGGCTGCGCTACGCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCTTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGgcgc                                                                                                                                     >  1:1095841/1‑150 (MQ=255)        cAGCCTGCTCACGGGCTGCGCTACGCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCtt                                                                                                                                  <  2:1384017/150‑1 (MQ=255)         aGCCTGCTCACGGGCTGCGCTACGCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTg                                                                                                                                 <  2:841486/150‑1 (MQ=255)         aGCCTGCTCACGGGCTGCGCTACGCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTg                                                                                                                                 >  1:714642/1‑150 (MQ=255)          gCCTGCTCACGGGCTGCGCTACGCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTgg                                                                                                                                >  2:23913/1‑150 (MQ=255)                tCACGGGCTGCGCTACGCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCa                                                                                                                          >  1:15469/1‑150 (MQ=255)                     ggCTGCGCTACGCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGcc                                                                                                                     <  1:1238136/150‑1 (MQ=255)                         gcgcTACGCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCcggcg                                                                                                                 <  2:603968/150‑1 (MQ=255)                           gcTACGCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCggg                                                                                                               <  2:1095841/150‑1 (MQ=255)                            cTACGCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGgccgccggcaatggcgcccaaggcgccaccaccg                                                                                                                    <  2:71966‑M1/144‑35 (MQ=255)                            cTACGCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGgccgccggcaatggcgcccaaggcgccaccaccg                                                                                                                    >  1:71966‑M1/1‑110 (MQ=255)                                gCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTggg                                                                                                                               >  1:674997/1‑129 (MQ=255)                                gCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTggg                                                                                                                               <  2:674997/129‑1 (MQ=255)                                gCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGAt                                                                                                          >  1:1356043/1‑150 (MQ=255)                                gCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGAt                                                                                                          <  2:1356043/150‑1 (MQ=255)                                                gcgcCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGAc                                                                                          <  1:76811/150‑1 (MQ=255)                                                    cccTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTg                                                                                      >  2:565961/1‑150 (MQ=255)                                                     ccTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGa                                                                                     <  2:533610/150‑1 (MQ=255)                                                       tcaatcaaAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGgc                                                                                                                                       >  1:909799/1‑98 (MQ=255)                                                       tcaatcaaAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGgc                                                                                                                                       <  2:909799/98‑1 (MQ=255)                                                       tcaatcaaAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACg                                                                                   >  2:153022/1‑150 (MQ=255)                                                         aatcaaAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGaa                                                                                 >  1:31569/1‑150 (MQ=255)                                                           tcaaAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGGGCCATTGCCGGCGGGCTGATTGGTTACGCTCAGGACGAGGACGAAGa                                                                               >  2:933709/1‑150 (MQ=255)                                                           tcaaAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGa                                                                               <  1:153022/150‑1 (MQ=255)                                                           tcaaAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGa                                                                               <  2:714642/150‑1 (MQ=255)                                                           tcaaAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGa                                                                               <  1:565961/150‑1 (MQ=255)                                                             aaaGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGaa                                                                                 >  2:272611/1‑146 (MQ=255)                                                             aaaGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGaa                                                                                 <  1:272611/146‑1 (MQ=255)                                                              aaGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGcccgccggcaatggcgcccaaggcgccaccaccggcggcccaggaag                                                                                                       <  1:1268644‑M1/123‑48 (MQ=255)                                                              aaGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGcccgccggcaatggcgcccaaggcgccaccaccggcggcccaggaag                                                                                                       >  2:1268644‑M1/1‑76 (MQ=255)                                                                      ggCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGCGACGGCa                                                                    >  1:463309/1‑150 (MQ=255)                                                                         ccATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGcccgccggcaatggcgcccaaggcgccaccaccggcggcc                                                                                                              >  2:271836‑M1/1‑65 (MQ=255)                                                                         ccATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGcccgccggcaatggcgcccaaggcgccaccaccggcggcc                                                                                                              <  1:271836‑M1/105‑41 (MQ=255)                                                                         ccATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCGAGGACGGTGACGAAGATGGTGACGGCAttt                                                                 >  2:774938/1‑150 (MQ=255)                                                                         ccATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGCccaggaagaactctcgatg                                                                                            <  2:514656‑M2/123‑20 (MQ=255)                                                                         ccATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGCccaggaagaactctcgatg                                                                                            >  1:514656‑M2/1‑104 (MQ=255)                                                                         ccATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGAGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCAttt                                                                 >  1:1247147/1‑150 (MQ=255)                                                                           aTCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGc                                                                                                              <  1:795324‑M2/103‑2 (MQ=255)                                                                           aTCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGc                                                                                                              >  2:795324‑M2/1‑102 (MQ=255)                                                                            tCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCg                                                              >  1:144512/1‑150 (MQ=255)                                                                                  gCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGcc                                                                                                <  1:101004/110‑1 (MQ=255)                                                                                  gCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGcc                                                                                                >  2:101004/1‑110 (MQ=255)                                                                                     tgctgGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGAttt                                                                                                        <  2:946111/99‑1 (MQ=255)                                                                                     tgctgGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGAttt                                                                                                        >  1:946111/1‑99 (MQ=255)                                                                                     tgctgGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGcgcg                                                     >  1:9245/1‑150 (MQ=255)                                                                                            cggcTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTg                                              >  1:563799/1‑150 (MQ=255)                                                                                               cTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGcccgccggcaatggcgcccaaggcgccaccaccggcggccc                                                                                                             <  1:888368‑M1/84‑42 (MQ=255)                                                                                               cTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGcccgccggcaatggcgcccaaggcgccaccaccggcggccc                                                                                                             >  2:888368‑M1/1‑43 (MQ=255)                                                                                               cTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGt                                                                           >  1:801529/1‑118 (MQ=255)                                                                                               cTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGt                                                                           <  2:801529/118‑1 (MQ=255)                                                                                                ttGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGcccc                                          <  1:1166005/150‑1 (MQ=255)                                                                                                        tggtggCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGACTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGAcccc                                  >  2:470635/1‑150 (MQ=255)                                                                                                         ggtggCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCg                                 <  2:673506/150‑1 (MQ=255)                                                                                                          gtggCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGAt                                                                              >  1:483986/1‑104 (MQ=255)                                                                                                          gtggCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGAt                                                                              <  2:483986/104‑1 (MQ=255)                                                                                                           tggCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGc                               <  1:659372/150‑1 (MQ=255)                                                                                                           tggCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGc                               <  1:455280/150‑1 (MQ=255)                                                                                                            ggCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCACGGcc                              >  1:560860/1‑150 (MQ=255)                                                                                                                   gTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCaa                            <  1:1226609/145‑1 (MQ=255)                                                                                                                   gTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCaa                            >  2:1226609/1‑145 (MQ=255)                                                                                                                   gTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCAACAcgg                       <  2:15469/150‑1 (MQ=255)                                                                                                                       cATCGAGAGTTCTTCCTGGgccgccggcaatggcgcccaaggcgccaccaccggcggcccaggaagaactctcgatggcaccaaggccaccaccgaccaagccgcccagcaggctgcagatgg                                              >  1:514656‑M1/1‑19 (MQ=255)                                                                                                                       cATCGAGAGTTCTTCCTGGgccgccggcaatggcgcccaaggcgccaccaccggcggcccaggaagaactctcgatggcaccaaggccaccaccgaccaagccgcccagcaggctgcagatgg                                              <  2:514656‑M1/123‑105 (MQ=255)                                                                                                                       cATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGa                                                                                           >  2:9075/1‑78 (MQ=255)                                                                                                                       cATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGa                                                                                           <  1:9075/78‑1 (MQ=255)                                                                                                                        aTCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGCGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCAACACGGCGGtt                  <  2:463309/150‑1 (MQ=255)                                                                                                                         tCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCAtt                                                                  >  2:552648/1‑101 (MQ=255)                                                                                                                         tCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCAtt                                                                  <  1:552648/101‑1 (MQ=255)                                                                                                                           gagaGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTg                                                                                      >  1:1304888/1‑79 (MQ=255)                                                                                                                           gagaGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTg                                                                                      <  2:1304888/79‑1 (MQ=255)                                                                                                                                ttcttcCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCAACACGGCGGTTGACCACAt          >  1:475895/1‑150 (MQ=255)                                                                                                                                ttcttcCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCAACACGGCGGTTGACCACAt          >  1:433450/1‑150 (MQ=255)                                                                                                                                  cttcCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGccaggaagaactctcgatggcaccaaggccaccaccgaccaagccgcccagcaggctgcagatgggccaggtcctt                                   <  1:1268644‑M2/123‑77 (MQ=255)                                                                                                                                  cttcCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGccaggaagaactctcgatggcaccaaggccaccaccgaccaagccgcccagcaggctgcagatgggccaggtcctt                                   >  2:1268644‑M2/1‑47 (MQ=255)                                                                                                                                     ccTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGCCCCCGGCCAACACGGCGGTTGACCACATGGGCt     <  1:1136984/150‑1 (MQ=255)                                                                                                                                        gggCCTCCGGTGGTGGTGCGTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCAACACGGCGGTTGACCACATGGGCTGcc  <  2:31569/150‑1 (MQ=255)                                                                                                                                        gggCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGccaggaagaactctcgatggcaccaaggccaccaccgaccaag                                                                    >  2:888368‑M2/1‑41 (MQ=255)                                                                                                                                        gggCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGccaggaagaactctcgatggcaccaaggccaccaccgaccaag                                                                    <  1:888368‑M2/84‑44 (MQ=255)                                                                                                                                         ggCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGccaggaagaactctcgatggcaccaaggccaccaccgaccaagccgcccagcaggctgcagatgg                                              >  2:271836‑M2/1‑40 (MQ=255)                                                                                                                                         ggCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGccaggaagaactctcgatggcaccaaggccaccaccgaccaagccgcccagcaggctgcagatgg                                              <  1:271836‑M2/105‑66 (MQ=255)                                                                                                                                         gcccgccggcaatggcgcccaaggcgccaccaccggcggcccaggaagaactctcgatggcaccaaggccaccaccgaccaagccgcccagcaggctgcagat                                                >  2:795324‑M1/1‑1 (MQ=255)                                                                                                                                         gcccgccggcaatggcgcccaaggcgccaccaccggcggcccaggaagaactctcgatggcaccaaggccaccaccgaccaagccgcccagcaggctgcagat                                                <  1:795324‑M1/103‑103 (MQ=255)                                                                                                                                         |                                                                                                                                                     TGGCTGCCAGCCTGCTCACGGGCTGCGCTACGCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCAACACGGCGGTTGACCACATGGGCTGCC  >  NC_002947/1284888‑1285172

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.