New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1285024	60 (1.140)	10 (0.190)	10/244	NT	15.0%	coding (249/795 nt)	PP_1122	OmpA family protein
	?	NC_002947	= 1285063	54 (1.040)					coding (288/795 nt)	PP_1122	OmpA family protein

GCTACGCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCAACACGGCGGTTGACCACATGGGCTGCCCACTGAAACAGTACCCGGCCGCGCCACCTGCCAGTGCACC  >  NC_002947/1284914‑1285212                                                                                                                                                      |                                                                                                                                                      gcTACGCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCggg                                                                                                                                                       <  2:1095841/150‑1 (MQ=255)      gCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGAt                                                                                                                                                  <  2:1356043/150‑1 (MQ=255)      gCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGAt                                                                                                                                                  >  1:1356043/1‑150 (MQ=255)                      gcgcCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGAc                                                                                                                                  <  1:76811/150‑1 (MQ=255)                          cccTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTg                                                                                                                              >  2:565961/1‑150 (MQ=255)                           ccTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGa                                                                                                                             <  2:533610/150‑1 (MQ=255)                             tcaatcaaAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACg                                                                                                                           >  2:153022/1‑150 (MQ=255)                               aatcaaAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGaa                                                                                                                         >  1:31569/1‑150 (MQ=255)                                 tcaaAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGGGCCATTGCCGGCGGGCTGATTGGTTACGCTCAGGACGAGGACGAAGa                                                                                                                       >  2:933709/1‑150 (MQ=255)                                 tcaaAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGa                                                                                                                       <  1:153022/150‑1 (MQ=255)                                 tcaaAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGa                                                                                                                       <  2:714642/150‑1 (MQ=255)                                 tcaaAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGa                                                                                                                       <  1:565961/150‑1 (MQ=255)                                   aaaGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGaa                                                                                                                         <  1:272611/146‑1 (MQ=255)                                   aaaGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGaa                                                                                                                         >  2:272611/1‑146 (MQ=255)                                            ggCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGCGACGGCa                                                                                                            >  1:463309/1‑150 (MQ=255)                                               ccATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCGAGGACGGTGACGAAGATGGTGACGGCAttt                                                                                                         >  2:774938/1‑150 (MQ=255)                                               ccATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGCccaggaagaactctcgatg                                                                                                                                    >  1:514656‑M2/1‑104 (MQ=255)                                               ccATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGCccaggaagaactctcgatg                                                                                                                                    <  2:514656‑M2/123‑20 (MQ=255)                                               ccATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGAGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCAttt                                                                                                         >  1:1247147/1‑150 (MQ=255)                                                 aTCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGc                                                                                                                                                      <  1:795324‑M2/103‑2 (MQ=255)                                                 aTCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGc                                                                                                                                                      >  2:795324‑M2/1‑102 (MQ=255)                                                  tCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCg                                                                                                      >  1:144512/1‑150 (MQ=255)                                                        gCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGcc                                                                                                                                        >  2:101004/1‑110 (MQ=255)                                                        gCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGcc                                                                                                                                        <  1:101004/110‑1 (MQ=255)                                                           tgctgGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGAttt                                                                                                                                                >  1:946111/1‑99 (MQ=255)                                                           tgctgGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGAttt                                                                                                                                                <  2:946111/99‑1 (MQ=255)                                                           tgctgGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGcgcg                                                                                             >  1:9245/1‑150 (MQ=255)                                                                  cggcTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTg                                                                                      >  1:563799/1‑150 (MQ=255)                                                                     cTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGt                                                                                                                   <  2:801529/118‑1 (MQ=255)                                                                     cTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGt                                                                                                                   >  1:801529/1‑118 (MQ=255)                                                                      ttGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGcccc                                                                                  <  1:1166005/150‑1 (MQ=255)                                                                              tggtggCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGACTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGAcccc                                                                          >  2:470635/1‑150 (MQ=255)                                                                               ggtggCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCg                                                                         <  2:673506/150‑1 (MQ=255)                                                                                gtggCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGAt                                                                                                                      >  1:483986/1‑104 (MQ=255)                                                                                gtggCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGAt                                                                                                                      <  2:483986/104‑1 (MQ=255)                                                                                 tggCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGc                                                                       <  1:659372/150‑1 (MQ=255)                                                                                 tggCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGc                                                                       <  1:455280/150‑1 (MQ=255)                                                                                  ggCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCACGGcc                                                                      >  1:560860/1‑150 (MQ=255)                                                                                         gTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCaa                                                                    >  2:1226609/1‑145 (MQ=255)                                                                                         gTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCaa                                                                    <  1:1226609/145‑1 (MQ=255)                                                                                         gTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCAACAcgg                                                               <  2:15469/150‑1 (MQ=255)                                                                                             cATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGa                                                                                                                                   <  1:9075/78‑1 (MQ=255)                                                                                             cATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGa                                                                                                                                   >  2:9075/1‑78 (MQ=255)                                                                                              aTCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGCGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCAACACGGCGGtt                                                          <  2:463309/150‑1 (MQ=255)                                                                                               tCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCAtt                                                                                                          >  2:552648/1‑101 (MQ=255)                                                                                               tCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCAtt                                                                                                          <  1:552648/101‑1 (MQ=255)                                                                                                 gagaGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTg                                                                                                                              <  2:1304888/79‑1 (MQ=255)                                                                                                 gagaGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTg                                                                                                                              >  1:1304888/1‑79 (MQ=255)                                                                                                      ttcttcCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCAACACGGCGGTTGACCACAt                                                  >  1:475895/1‑150 (MQ=255)                                                                                                      ttcttcCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCAACACGGCGGTTGACCACAt                                                  >  1:433450/1‑150 (MQ=255)                                                                                                        cttcCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGccaggaagaactctcgatggcaccaaggccaccaccgaccaagccgcccagcaggctgcagatgggccaggtcctt                                                                           >  2:1268644‑M2/1‑47 (MQ=255)                                                                                                        cttcCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGccaggaagaactctcgatggcaccaaggccaccaccgaccaagccgcccagcaggctgcagatgggccaggtcctt                                                                           <  1:1268644‑M2/123‑77 (MQ=255)                                                                                                           ccTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGCCCCCGGCCAACACGGCGGTTGACCACATGGGCt                                             <  1:1136984/150‑1 (MQ=255)                                                                                                              gggCCTCCGGTGGTGGTGCGTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCAACACGGCGGTTGACCACATGGGCTGcc                                          <  2:31569/150‑1 (MQ=255)                                                                                                              gggCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGccaggaagaactctcgatggcaccaaggccaccaccgaccaag                                                                                                            >  2:888368‑M2/1‑41 (MQ=255)                                                                                                              gggCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGccaggaagaactctcgatggcaccaaggccaccaccgaccaag                                                                                                            <  1:888368‑M2/84‑44 (MQ=255)                                                                                                               ggCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGccaggaagaactctcgatggcaccaaggccaccaccgaccaagccgcccagcaggctgcagatgg                                                                                      >  2:271836‑M2/1‑40 (MQ=255)                                                                                                               ggCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGccaggaagaactctcgatggcaccaaggccaccaccgaccaagccgcccagcaggctgcagatgg                                                                                      <  1:271836‑M2/105‑66 (MQ=255)                                                                                                                     cgGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGCccaggaagaactctcgatggcaccaaggccaccaccgaccaagccgcccagcaggctgcagatgggccaggtcctttgattgaggggcgcgctgccatcgctgtgcgtag                                         <  2:71966‑M2/144‑111 (MQ=255)                                                                                                                     cgGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGCccaggaagaactctcgatggcaccaaggccaccaccgaccaagccgcccagcaggctgcagatgggccaggtcctttgattgaggggcgcgctgccatcgctgtgcgtag                                         >  1:71966‑M2/1‑34 (MQ=255)                                                                                                                        tggtggCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCAACACGGCGGTTGACCACATGGGCTGCCCACTGAAACa                                <  1:933709/150‑1 (MQ=255)                                                                                                                           tggCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCgaga                                                                              >  2:1160193/1‑101 (MQ=255)                                                                                                                           tggCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCgaga                                                                              <  1:1160193/101‑1 (MQ=255)                                                                                                                             gcgcCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGcc                                                                                    >  1:907273/1‑93 (MQ=255)                                                                                                                             gcgcCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGcc                                                                                    <  2:907273/93‑1 (MQ=255)                                                                                                                             gcgcCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCAACACGGCGGTTGACCACAt                                                  <  2:193120/127‑1 (MQ=255)                                                                                                                             gcgcCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCAACACGGCGGTTGACCACAt                                                  >  1:193120/1‑127 (MQ=255)                                                                                                                                ccTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCAACACGGCGGTTGACCACATGGGCTGCCCACTGAAACAGTACCCgg                        >  1:375698/1‑150 (MQ=255)                                                                                                                                  ttGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCAACACGGCGGTTGACCACATGGGCTGCCCACTGAAACAGTACCCGGcc                      >  1:536860/1‑150 (MQ=255)                                                                                                                                                   cggGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCAACACGGCGGTTGACCACATGGGCTGCCCACTGAAACAGTACCCGGCCGCGCCACCTGCCAGTGc     <  1:23913/150‑1 (MQ=255)                                                                                                                                                      gCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGCGACTCCTGCCAACACGGCGGTTGACACCGTCACCTTCGCGCATAAACAGTACCCGGCCGCGCCACCTGCCAGTGCAcc  >  1:319222/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                      GCTACGCACAGCGATGGCAGCGCGCCCCTCAATCAAAGGACCTGGCCCATCTGCAGCCTGCTGGGCGGCTTGGTCGGTGGTGGCCTTGGTGCCATCGAGAGTTCTTCCTGGGCCGCCGGTGGTGGCGCCTTGGGCGCCATTGCCGGCGGGCTGATTTGTTACGCCCAGGACGGTGACGAAGATGGTGACGGCATTTTCGACCGGCGCGATCACTGCCCCGAGACCCCGGCCAACACGGCGGTTGACCACATGGGCTGCCCACTGAAACAGTACCCGGCCGCGCCACCTGCCAGTGCACC  >  NC_002947/1284914‑1285212

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.