New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1636094	43 (0.820)	4 (0.080)	4/228	NT	8.8%	coding (229/684 nt)	recO	DNA repair protein RecO
	?	NC_002947	= 1636104	43 (0.880)					coding (239/684 nt)	recO	DNA repair protein RecO

CCCGCAGGGCCGCATGCGTGCCGTGTTGCGTCGCGCG‑CGCAGTAAGGGCGGCAGCCTGGTGCGGCCGTTCGTGTCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCGAACACTACACCTTGACCTTGCAGGCCCTGGCTGAAGGCCGCCCGCTGGAACC  >  NC_002947/1635949‑1636242                                                                                                                                                   |                                                                                                                                                     cccGCAGGGCCGCATGCGTGCCGTGTTGCGTCGCGCG‑CGCAGTAAGGGCGGCAGCCTGGTGCGGCCGTTCGTGTCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTg                                                                                                                                                  >  2:698713/1‑150 (MQ=255)  tcGCAGGGCCGCATGCGTGCCGTGTTGCGTCGCGCG‑CGCAGTAAGGGCGGCAGCCTGGTGCGGCCGTTCGTGTCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTgg                                                                                                                                                 >  2:317343/2‑150 (MQ=255)         gCCGCATGCGTGCCGTGTTGCGTCGCGCG‑CGCAGTAAGGGCGGCAGCCTGGTGCGGCCGTTCGTGTCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCAcg                                                                                                                                          >  1:698713‑M2/1‑148 (MQ=255)            gCATGCGTGCCGTGTTGCGTCGCGCG‑CGCAGTAAGGGCGGCAGCCTGGTGCGGCCGTTCGTGTCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCAcggcg                                                                                                                                       <  2:1219501‑M2/150‑6 (MQ=255)              aTGCGTGCCGTGTTGCGTCGCGCG‑CGCAGTAAGGGCGGCAGCCTGGTGCGGCCGTTCGTGTCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCAcggcgat                                                                                                                                     >  1:920668‑M2/1‑143 (MQ=255)                   tGCCGTGTTGCGTCGCGCG‑CGCAGTAAGGGCGGCAGCCTGGTGCGGCCGTTCGTGTCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCt                                                                                                                                <  1:681248/150‑1 (MQ=255)                      cGTGTTGCGTCGCGCG‑CGCAGTAAGGGCGGCAGCCTGGTGCGGCCGTTCGTGTCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGtt                                                                                                                             >  2:1135235/1‑150 (MQ=255)                        tgtTGCGTCGCGCG‑CGCAGTAAGGGCGGCAGCCTGGTGCGGCCGTTCGTGTCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCa                                                                                                                           >  2:484830/1‑150 (MQ=255)                            tgcgcgcgcgacGCAGTAAGGGCGGCAGCCTGGTGCGGCCGTTCGTGTCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGt                                                                                                                              >  2:394891/5‑144 (MQ=255)                            tgcgcgcgcgacGCAGTAAGGGCGGCAGCCTGGTGCGGCCGTTCGTGTCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGt                                                                                                                              <  1:394891/140‑1 (MQ=255)                                   gcg‑cgcAGTAAGGGCGGCAGCCTGGTGCGGCCGTTCGTGTCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTAc                                                                                                                <  2:419260/150‑1 (MQ=255)                                          aGTAAGGGCGGCAGCCTGGTGCGGCCGTTCGTGTCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAAt                                                                                                          <  1:242941/150‑1 (MQ=255)                                            tAAGGGCGGCAGCCTGGTGCGGCCGTTCGTGTCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGa                                                                                                        >  2:35235/1‑150 (MQ=255)                                                  cggcAGCCTGGTGCGGCCGTTCGTGTCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCt                                                                                                  >  2:722919/1‑150 (MQ=255)                                                  cggcAGCCTGGTGAGGCGGTTCGTGTCGCGGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGACAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCt                                                                                                  <  1:1380578/150‑1 (MQ=255)                                                   ggcAGCCTGGTGCGGCCGTTCGTGTCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCGGAAGAATGTCAGCCACATGGACAGCACCCGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTg                                                                                                 >  1:525091/1‑150 (MQ=255)                                                    gcAGCCTGGTGCGGCCGTTCGTGTCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGa                                                                                                <  1:1219501/150‑1 (MQ=255)                                                         cTGGTGCGGCCGTTCGTGTCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGt                                                                                           <  1:778720/150‑1 (MQ=255)                                                             tGCGGCCGTTCGTGTCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTctgc                                                                                       <  1:1067074/150‑1 (MQ=255)                                                                          gtCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGc                                                                          >  2:868444/1‑150 (MQ=255)                                                                                   ggTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTcc                                                                 <  1:416827/150‑1 (MQ=255)                                                                                    gTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGtgaagccaggcggcgat                                                                                                                                     >  2:994741‑M1/1‑64 (MQ=255)                                                                                    gTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGtgaagccaggcggcgat                                                                                                                                     <  1:994741‑M1/81‑18 (MQ=255)                                                                                      ggAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGccc                                                                                  >  1:393541/1‑130 (MQ=255)                                                                                      ggAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGccc                                                                                  <  2:393541/130‑1 (MQ=255)                                                                                             cgttggcgtggCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTc                                                       <  1:761254/150‑1 (MQ=255)                                                                                                gggcgtggCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCGaa                                                    <  1:868444/150‑1 (MQ=255)                                                                                                          aGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCg                                                      <  1:104811/138‑1 (MQ=255)                                                                                                          aGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCg                                                      >  2:104811/1‑138 (MQ=255)                                                                                                            cTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGATGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCTACCATTTTCGAACACTACaccttg                                        >  2:144677/1‑150 (MQ=255)                                                                                                             tGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCGAACACTACaccttga                                       >  2:607637/1‑150 (MQ=255)                                                                                                              gaagaaTGTCAGCCGCATGGACAGCACCGGCATCGCCGtgaagccaggcggcgatgccg                                                                                                                                 >  2:705100‑M1/1‑38 (MQ=255)                                                                                                              gaagaaTGTCAGCCGCATGGACAGCACCGGCATCGCCGtgaagccaggcggcgatgccg                                                                                                                                 <  1:705100‑M1/59‑22 (MQ=255)                                                                                                                      tCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCGAACACTACACCTTGACCTTGCAgg                              >  2:157683/1‑150 (MQ=255)                                                                                                                        aGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCGAACACTACACCTTGACCTTGCAGGcc                            >  1:639451/1‑150 (MQ=255)                                                                                                                           cGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGGGGGTTGTACCTGAATGAGTTGATGCTGCGTCTGCTGCACGAGAAATCACCCTTTTGTTCCATTTTCCAACACTACACCTTGACCTTGCAGGCCCTg                         <  1:27074/150‑1 (MQ=255)                                                                                                                            gCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCGAACACTACACCTTGACCTTGCAGGCCCTgg                        <  1:722919/150‑1 (MQ=255)                                                                                                                             cATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCGAACACTACACCTTGACCTTGCAGGCCCTGGc                       >  2:1208615/1‑150 (MQ=255)                                                                                                                             cATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGAACATTTTCGAACACTACACCTTGACCTTGCAGGCCCTGGc                       >  1:656558/1‑150 (MQ=255)                                                                                                                              aTGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCGAACACTACACCTTGACCTTGCAGGCCCTGGCt                      >  1:1262765/1‑150 (MQ=255)                                                                                                                               tGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCGAACACTACACCTTGACCTTGCAGGCCCTGGCTg                     >  1:533664/1‑150 (MQ=255)                                                                                                                               tGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATGTTCGAACACTACACCTTGACCTTGTAGGACCTGGCTg                     >  2:324216/1‑150 (MQ=255)                                                                                                                                 gACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCGAACACTACACCTTGACCTTGCAGGCCCTGGCTGaa                   <  2:533664/150‑1 (MQ=255)                                                                                                                                 gACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCGAACACTACACCTTGACCTTGCAGGCCCTGGCTGaa                   <  2:639451/150‑1 (MQ=255)                                                                                                                                  aCAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCGAACACTACACCTTGACCTTGCAGGCCCTGGCTGAAg                  <  1:35235/150‑1 (MQ=255)                                                                                                                                  aCAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCGAACACTACACCTTGACCTTGCAGGCCCTGGCTGAAg                  >  1:265146/1‑150 (MQ=255)                                                                                                                                  aCAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCGAACACTACACCTTGACCTTGCAGGCCCTGGCTGAAg                  <  1:1135235/150‑1 (MQ=255)                                                                                                                                      cACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCGAACACTACACCTTGACCTTGCAGGCCCTGGCTGAAGgccg              >  2:1347239/1‑150 (MQ=255)                                                                                                                                      cACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCAACGTTTCCGACCATTTTCGAACACTACACCTGGACCTTGCAGGCCCTGGCTGAAGgccg              >  2:232433/1‑150 (MQ=255)                                                                                                                                      cACCGGCATCGCCGCCTGGCATCACGGCAATGCGCAGCACAGCGGGTTGTACCCGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGATGCACCGTTTCCGACCATTTTCGAACACTACACCTTGCCCGTGCAGGCCCTGCCTGCAGgccg              >  2:427989/1‑150 (MQ=255)                                                                                                                                         cGGCATCGCCGCCTGGCTTCAcggcgatgccggtgctgtccatgcggctgacattcttc                                                                                                      >  2:705100‑M2/1‑21 (MQ=255)                                                                                                                                         cGGCATCGCCGCCTGGCTTCAcggcgatgccggtgctgtccatgcggctgacattcttc                                                                                                      <  1:705100‑M2/59‑39 (MQ=255)                                                                                                                                         cGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCGAACACTCCACCTTGACCTTGCAGGCCCTGGCTGAAGGccgccc           >  1:7657/1‑150 (MQ=255)                                                                                                                                             aTCGCCGtgaagccaggcggcgatgccggtgctgtccatgcggctgacattcttcagctcgccacgcccacgcagctccacctccagcgacacgaacggccgcaccaggctgccgcccttactgcgcgcgcgacgcaacacggcacgcat       >  1:920668‑M1/1‑7 (MQ=255)                                                                                                                                             aTCGCCGCCTGGCTTCAcggcgatgccggtgctgtccatgcggctgacattcttcagctcgccacgcccacgcagctccac                                                                            >  2:994741‑M2/1‑17 (MQ=255)                                                                                                                                             aTCGCCGCCTGGCTTCAcggcgatgccggtgctgtccatgcggctgacattcttcagctcgccacgcccacgcagctccac                                                                            <  1:994741‑M2/81‑65 (MQ=255)                                                                                                                                             aTCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCGAACACTACACCTTGACCTTGCAGGCCCTGGCTGAAGGCCGCCCGCTg       <  1:607637/150‑1 (MQ=255)                                                                                                                                               cGCCGtgaagccaggcggcgatgccggtgctgtccatgcggctgacattcttcagctcgccacgcccacgcagctccacctccagcgacacgaacggccgcaccaggctgccgcccttactgcgcgcgcgacgcaacacggcacgcatgc     <  2:1219501‑M1/150‑146 (MQ=255)                                                                                                                                                  cGtgaagccaggcggcgatgccggtgctgtccatgcggctgacattcttcagctcgccacgcccacgcagctccacctccagcgacacgaacggccgcaccaggctgccgcccttactgcgcgcgcgacgcaacacggcacgcatgcggc  >  1:698713‑M1/1‑2 (MQ=255)                                                                                                                                                   gccTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCGAACACTACACCTTGACCTTGCAGGCCCTGGCTGAAg                  >  1:22554/1‑133 (MQ=255)                                                                                                                                                   gccTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCGAACACTACACCTTGACCTTGCAGGCCCTGGCTGAAg                  <  2:22554/133‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                     CCCGCAGGGCCGCATGCGTGCCGTGTTGCGTCGCGCG‑CGCAGTAAGGGCGGCAGCCTGGTGCGGCCGTTCGTGTCGCTGGAGGTGGAGCTGCGTGGGCGTGGCGAGCTGAAGAATGTCAGCCGCATGGACAGCACCGGCATCGCCGCCTGGCTTCACGGCGATGCGCTGTTCAGCGGGTTGTACCTGAATGAGTTGCTGATGCGTCTGCTGCCCGCCGAAGCACCGTTTCCGACCATTTTCGAACACTACACCTTGACCTTGCAGGCCCTGGCTGAAGGCCGCCCGCTGGAACC  >  NC_002947/1635949‑1636242

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.