New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2982452 =	51 (0.970)	3 (0.060)	3/234	NT	5.6%	coding (770/810 nt)	PP_2608	shikimate dehydrogenase family protein
	?	NC_002947	2982485 =	53 (1.060)					coding (737/810 nt)	PP_2608	shikimate dehydrogenase family protein

CTTCAGCCCACGGCGGGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCG  >  NC_002947/2982303‑2982598                                                                                                                                                      |                                                                                                                                                   cTTCAGCCCACGGCGGGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGt                                                                                                                                                    <  1:1166320/150‑1 (MQ=255) cTTCAGCCCACGGCGGGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGt                                                                                                                                                    >  2:427076/1‑150 (MQ=255)  ttCAGCCCACGGCGGGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTg                                                                                                                                                   <  1:427076/150‑1 (MQ=255)     gcatgggcacccgcgcagagctgccgttgtccgccgccctgctggctaccctgcagccagacaccctggtcgccgacgtggtcacctcacccgagatcaccccgctgctgaaccgcgcgcggcaagtaggttgcaggatccagacTGGcc                                                                                                                                                <  1:881290‑M1/5‑1 (MQ=255)      gCCCACGGCGGGCCGCGGTGGCGGCAGCGGCAAAACATCACTCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGccc                                                                                                                                               <  1:374255/150‑1 (MQ=255)            ggcggGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTTACGCCCATGAAGCCTCCAAGGGGGCCCAGTTgg                                                                                                                                         <  2:419876/150‑1 (MQ=255)            ggcggGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGACGATTTGGCTTCAGATCTCCAACGGTGTGGCTCCCATGAAGGCGCCAAGGTGGCCCAGTTgg                                                                                                                                         >  1:1303104/1‑150 (MQ=255)                 gCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGaa                                                                                                                                    <  1:674939/150‑1 (MQ=255)                 gCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGaa                                                                                                                                    <  2:594876/150‑1 (MQ=255)                   gcagagctgccgttgtccgccgccctgctggctaccctgcagccagacaccctggtcgccgacgtggtcacctcacccgagatcaccccgctgctgaaccgcgcgcggcaagtaggttgcaggatccagacTGGccc                                                                                                                                               >  1:92159‑M1/132‑137 (MQ=255)                   gcagagctgccgttgtccgccgccctgctggctaccctgcagccagacaccctggtcgccgacgtggtcacctcacccgagatcaccccgctgctgaaccgcgcgcggcaagtaggttgcaggatccagacTGGccc                                                                                                                                               <  2:92159‑M1/6‑1 (MQ=255)                              cagcggcaAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTTTGCGCCAGAGTCGTCATCGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCAtttgtgga                                                                                                                       <  2:421231/150‑6 (MQ=255)                                     gccgccctgctggctaccctgcagccagacaccctggtcgccgacgtggtcacctcacccgagatcaccccgctgctgaaccgcgcgcggcaagtaggttgcaggatccagacTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCt                                                                                                                >  2:854213‑M1/114‑150 (MQ=255)                                          caccGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATc                                                                                                           <  2:842696/150‑1 (MQ=255)                                          caccGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATc                                                                                                           <  2:118535/150‑1 (MQ=255)                                                 aCCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAAc                                                                                                    <  1:572048/150‑1 (MQ=255)                                                       ctgcagccagacaccctggtcgccgacgtggtcacctcacccgagatcaccccgctgctgaaccgcgcgcggcaagtaggttgcaggatccagacTGGccc                                                                                                                                               <  1:936268‑M1/6‑1 (MQ=255)                                                       ctgcagccagacaccctggtcgccgacgtggtcacctcacccgagatcaccccgctgctgaaccgcgcgcggcaagtaggttgcaggatccagacTGGccc                                                                                                                                               >  2:936268‑M1/96‑101 (MQ=255)                                                           aGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCcg                                                                                          >  2:1357043/1‑150 (MQ=255)                                                                   cAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGt                                                                                  >  1:116615/1‑150 (MQ=255)                                                                      gTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTca                                                                               >  2:456536/1‑150 (MQ=255)                                                                            gCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGATTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCg                                                                         <  2:1303104/150‑1 (MQ=255)                                                                              tgttgtGTGTCTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCggg                                                                       <  2:157049/150‑1 (MQ=255)                                                                              ggttgtGTGTGTGCACCAGTGTCGTCCTGGCTTCAGATCTCCAACGGTGTGAGGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCggg                                                                       <  2:156981/149‑1 (MQ=255)                                                                                        gtgCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCgg                                                             >  1:57834/1‑150 (MQ=255)                                                                                         ggCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCggg                                                            <  1:402638/149‑1 (MQ=255)                                                                                            tCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAATGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCAGCGCGCGGTTCAGCAGCGGGGTGATCTCGggtga                                                         >  2:372932/1‑150 (MQ=255)                                                                                            tCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCGAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGggtga                                                         <  1:1357043/150‑1 (MQ=255)                                                                                             ccAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAATGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGggtgag                                                        <  1:372932/150‑1 (MQ=255)                                                                                              cAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGaa                                                                                                                                    <  1:18937/73‑1 (MQ=255)                                                                                              cAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGaa                                                                                                                                    >  2:18937/1‑73 (MQ=255)                                                                                              cAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTCACGCCCATGCACGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGggtgagg                                                       >  1:740324/1‑150 (MQ=255)                                                                                                   tcgtcATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGAcc                                                  <  1:679638/150‑1 (MQ=255)                                                                                                     gtcATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTGCGGGCCAGTCTGTATCCTGCAACCTACTTGCCGCGCGCAGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCAc                                                >  2:320401/1‑150 (MQ=255)                                                                                                      tcATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGa                                                                                                             <  2:775074/88‑1 (MQ=255)                                                                                                      tcATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGa                                                                                                             >  1:775074/1‑88 (MQ=255)                                                                                                      tcATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACg                                               >  1:1219965/1‑150 (MQ=255)                                                                                                       accccgctgctgaaccgcgcgcggcaagtaggttgcaggatccagacTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGt                                                                                                                  <  2:971430‑M1/35‑1 (MQ=255)                                                                                                       accccgctgctgaaccgcgcgcggcaagtaggttgcaggatccagacTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGt                                                                                                                  >  1:971430‑M1/48‑82 (MQ=255)                                                                                                                  aTCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAgg                                   <  1:1195982/150‑1 (MQ=255)                                                                                                                    ctcCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGgt                                 >  2:435514/1‑150 (MQ=255)                                                                                                                      ccAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGgtgt                               >  1:1325766/1‑150 (MQ=255)                                                                                                                       cAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGggtgag                                                        <  2:364610/124‑1 (MQ=255)                                                                                                                       cAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGggtgag                                                        >  1:364610/1‑124 (MQ=255)                                                                                                                       cAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTc                              >  1:170394/1‑150 (MQ=255)                                                                                                                        aaCGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCt                             >  1:156414/1‑150 (MQ=255)                                                                                                                        aaCGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGATCAGCAGCGGGGTGATCTCGGGAGAGGTGACCACGTCGGCGACCAGGGTGTCt                             >  2:741085/1‑150 (MQ=255)                                                                                                                                gACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGt                                                                                  <  2:1333868/89‑1 (MQ=255)                                                                                                                                gACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGt                                                                                  >  1:1333868/1‑89 (MQ=255)                                                                                                                                   gCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCg                                                                         >  1:341826/1‑95 (MQ=255)                                                                                                                                   gCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCg                                                                         <  2:341826/95‑1 (MQ=255)                                                                                                                                    cccATGAAGTCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTa                 <  2:116615/150‑1 (MQ=255)                                                                                                                                    cccATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTa                 <  2:1325766/150‑1 (MQ=255)                                                                                                                                     ccATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGtt                                                                                 <  1:473161/85‑1 (MQ=255)                                                                                                                                     ccATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGtt                                                                                 >  2:473161/1‑85 (MQ=255)                                                                                                                                     ccATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCAc                                                >  2:1170626/1‑118 (MQ=255)                                                                                                                                     ccATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCAc                                                <  1:1170626/118‑1 (MQ=255)                                                                                                                                     ccATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAg                >  1:742475/1‑150 (MQ=255)                                                                                                                                           aGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCcagca          >  1:1049103/1‑150 (MQ=255)                                                                                                                                            ggCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGAGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCcagcag         >  1:204972/1‑150 (MQ=255)                                                                                                                                              cgcCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAggg       <  2:57834/150‑1 (MQ=255)                                                                                                                                               gcCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGggc      >  2:268627/1‑150 (MQ=255)                                                                                                                                                 cAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGGTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGggcgg    >  2:1219283/1‑150 (MQ=255)                                                                                                                                                  aaGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTTACAAGTGGGGTGATCTCGGGTGAGGTGACCAAATCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGggcggc   >  1:94265/1‑150 (MQ=255)                                                                                                                                                   aGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGgcggcg  >  2:881290/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                   CTTCAGCCCACGGCGGGCCGCGGTGGCGGCAGCGGCAAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCG  >  NC_002947/2982303‑2982598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.