| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2982452 = | 51 (0.970) | 3 (0.060) | 3/234 | NT | 5.6% | coding (770/810 nt) | PP_2608 | shikimate dehydrogenase family protein |
| ? | NC_002947 | 2982485 = | 53 (1.060) | coding (737/810 nt) | PP_2608 | shikimate dehydrogenase family protein | |||||
AAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGACAACGGCAGCTCTGCGCGGGTGCCCATGC > NC_002947/2982339‑2982629 | gccgccctgctggctaccctgcagccagacaccctggtcgccgacgtggtcacctcacccgagatcaccccgctgctgaaccgcgcgcggcaagtaggttgcaggatccagacTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCt > 2:854213‑M1/114‑150 (MQ=255) caccGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATc < 2:842696/150‑1 (MQ=255) caccGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATc < 2:118535/150‑1 (MQ=255) aCCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAAc < 1:572048/150‑1 (MQ=255) aGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCcg > 2:1357043/1‑150 (MQ=255) cAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGt > 1:116615/1‑150 (MQ=255) gTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTca > 2:456536/1‑150 (MQ=255) gCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGATTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCg < 2:1303104/150‑1 (MQ=255) tgttgtGTGTCTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCggg < 2:157049/150‑1 (MQ=255) ggttgtGTGTGTGCACCAGTGTCGTCCTGGCTTCAGATCTCCAACGGTGTGAGGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCggg < 2:156981/149‑1 (MQ=255) gtgCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCgg > 1:57834/1‑150 (MQ=255) ggCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCggg < 1:402638/149‑1 (MQ=255) tCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAATGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCAGCGCGCGGTTCAGCAGCGGGGTGATCTCGggtga > 2:372932/1‑150 (MQ=255) tCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCGAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGggtga < 1:1357043/150‑1 (MQ=255) ccAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAATGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGggtgag < 1:372932/150‑1 (MQ=255) cAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTCACGCCCATGCACGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGggtgagg > 1:740324/1‑150 (MQ=255) tcgtcATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGAcc < 1:679638/150‑1 (MQ=255) gtcATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTGCGGGCCAGTCTGTATCCTGCAACCTACTTGCCGCGCGCAGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCAc > 2:320401/1‑150 (MQ=255) tcATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGa < 2:775074/88‑1 (MQ=255) tcATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGa > 1:775074/1‑88 (MQ=255) tcATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACg > 1:1219965/1‑150 (MQ=255) accccgctgctgaaccgcgcgcggcaagtaggttgcaggatccagacTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGt > 1:971430‑M1/48‑82 (MQ=255) accccgctgctgaaccgcgcgcggcaagtaggttgcaggatccagacTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGt < 2:971430‑M1/35‑1 (MQ=255) aTCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAgg < 1:1195982/150‑1 (MQ=255) ctcCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGgt > 2:435514/1‑150 (MQ=255) ccAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGgtgt > 1:1325766/1‑150 (MQ=255) cAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGggtgag < 2:364610/124‑1 (MQ=255) cAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGggtgag > 1:364610/1‑124 (MQ=255) cAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTc > 1:170394/1‑150 (MQ=255) aaCGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCt > 1:156414/1‑150 (MQ=255) aaCGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGATCAGCAGCGGGGTGATCTCGGGAGAGGTGACCACGTCGGCGACCAGGGTGTCt > 2:741085/1‑150 (MQ=255) gACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGt < 2:1333868/89‑1 (MQ=255) gACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGt > 1:1333868/1‑89 (MQ=255) gCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCg < 2:341826/95‑1 (MQ=255) gCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCg > 1:341826/1‑95 (MQ=255) cccATGAAGTCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTa < 2:116615/150‑1 (MQ=255) cccATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTa < 2:1325766/150‑1 (MQ=255) ccATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGtt > 2:473161/1‑85 (MQ=255) ccATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGtt < 1:473161/85‑1 (MQ=255) ccATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCAc > 2:1170626/1‑118 (MQ=255) ccATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCAc < 1:1170626/118‑1 (MQ=255) ccATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAg > 1:742475/1‑150 (MQ=255) aGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCcagca > 1:1049103/1‑150 (MQ=255) ggCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGAGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCcagcag > 1:204972/1‑150 (MQ=255) cgcCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAggg < 2:57834/150‑1 (MQ=255) gcCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGggc > 2:268627/1‑150 (MQ=255) cAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGGTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGggcgg > 2:1219283/1‑150 (MQ=255) agactggcccggaaatggccttcgcccaactgggccaGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGggcggc > 2:854213‑M2/38‑150 (MQ=255) aaGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTTACAAGTGGGGTGATCTCGGGTGAGGTGACCAAATCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGggcggc > 1:94265/1‑150 (MQ=255) aGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGgcggcg > 2:881290/1‑150 (MQ=255) actggcccggaaatggccttcgcccaactgggccaGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGt < 2:971430‑M2/47‑1 (MQ=255) actggcccggaaatggccttcgcccaactgggccaGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGt > 1:971430‑M2/36‑82 (MQ=255) CCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGa < 1:335688‑M1/145‑1 (MQ=255) CCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGa > 2:335688‑M1/1‑145 (MQ=255) gCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGACAACGGCAGctct > 2:905711/1‑150 (MQ=255) ccATTTCCGGTCCTGTGTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGACAACGGCAGCTCTGCGCggg > 2:415585/1‑150 (MQ=255) cATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAg > 1:456891/1‑113 (MQ=255) cATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAg < 2:456891/113‑1 (MQ=255) aTTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTca > 2:416701/1‑49 (MQ=255) aTTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTca < 1:416701/49‑1 (MQ=255) aTTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGACAACGGCAGCTCTGCGCGGGTg < 2:156414/150‑1 (MQ=255) gggccaGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAg < 1:936268‑M2/95‑1 (MQ=255) gggccaGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAg > 2:936268‑M2/7‑101 (MQ=255) gggccaGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGACAACGGCAGCTCTgc > 1:92159‑M2/7‑137 (MQ=255) gggccaGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGACAACGGCAGCTCTgc < 2:92159‑M2/131‑1 (MQ=255) ggccaGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGACAACGGCAGCTCTGCGCGGGTGCCCATGc < 1:881290‑M2/145‑1 (MQ=255) | AAAACCACCGGCACCGCTGCCCAGCACAACCAGGTCGAAGCTGTTGTGTGTGTGCTCCAGAGTCGTCATGGCTTCAGATCTCCAACGGTGTGACGCCCATGAAGGCGCCAAGGTGGCCCAGTTGGGCGAAGGCCATTTCCGGGCCAGTCTGGATCCTGCAACCTACTTGCCGCGCGCGGTTCAGCAGCGGGGTGATCTCGGGTGAGGTGACCACGTCGGCGACCAGGGTGTCTGGCTGCAGGGTAGCCAGCAGGGCGGCGGACAACGGCAGCTCTGCGCGGGTGCCCATGC > NC_002947/2982339‑2982629 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |