New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3216579 =	56 (1.070)	5 (0.100)	4/238	NT	8.5%	coding (2451/3129 nt)	mexD	multidrug RND transporter MexD
	?	NC_002947	3216615 =	54 (1.060)					coding (2487/3129 nt)	mexD	multidrug RND transporter MexD

AGGCAGAGCAAGGCGAACGCATGACCCCCGAAAGCGTGCTGCGCCTCTATGCTCCCAATGCCAACGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCA  >  NC_002947/3216434‑3216721                                                                                                                                                  |                                                                                                                                               aggcagAGCAAGGCGAACGCATGACCCCCGAAAGCGTGCTGCGCCTCTATGCTCCCAATGCCAACGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGt                                                                                                                                            <  1:332338/150‑1 (MQ=255)            ggCGAACGCATGACCCCCGAAAGCGTGCTGCGCCTCTATGCTCCCAATGCCAACGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATc                                                                                                                                 >  2:238986/1‑150 (MQ=255)                 aagCATGACCCCCGAAAGCGTGCTGCGCCTCTATGCTCCCAATGCCAACGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCgg                                                                                                                            <  1:703599/148‑1 (MQ=255)                         cccccGAAAGCGTGCTGCGCCTCTATGCTCCCAATGCCAACGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCt                                                                                                                    >  2:931161/1‑150 (MQ=255)                          ccccGAAAGCGTGCTGCGCCTCTATGCTCCCAATGCCAACGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTc                                                                                                                   <  1:328952/150‑1 (MQ=255)                            ccGAAAGCGTGCTGCGCCTCTATGCTCCCAATGCCAACGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGc                                                                                                                 >  2:1134134/1‑150 (MQ=255)                              gAAAGCGTGCTGCGCCTCTATGCTCCCAATGCCAACGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCg                                                                                                               <  1:1221309/150‑1 (MQ=255)                               ctggccgctggagaccttctcctggtaggaaaggcccgtccaggcgtagccgatacctggcggcagctcgctgaccaggcgctccatctcggccattgcctgcccggtactgtgcCCCGTCGATCCGCATCGCCGGCGACGCCTCGCCgg                                                                                                              >  2:1289724‑M1/116‑150 (MQ=255)                                aaGCGTGCTGCGCCTCTATGCTCCCACTGCCAACGGCCAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCggg                                                                                                             <  1:299396/150‑1 (MQ=255)                                  gCGTGCTGCGCCTCTATGCTCCCAATGCCAACGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGc                                                                                                           <  1:1134134/150‑1 (MQ=255)                                    gTGCTGCGCCTCTATGCTCCCAATGCCAACGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGcac                                                                                                         >  1:34335/1‑150 (MQ=255)                                      gctgcGCCTCTATGCTCCCAATGCCAACGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGCTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAg                                                                                                       <  1:238986/150‑1 (MQ=255)                                         gcgcCTCTATGCTCCCAATGCCAACGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTAc                                                                                                    >  1:853922/1‑150 (MQ=255)                                             ctctATGCTCCCAATGCCAACGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATAGCCGGCGACGCCTCGCCGGGGCACAGTACCggg                                                                                                >  2:468075/1‑150 (MQ=255)                                                       ccAATGCCAACGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAAGTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCgg                                                                                                                            >  1:382544/1‑112 (MQ=255)                                                       ccAATGCCAACGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCGACAACGGTTACCCGTCGATCCGCATCGCCgg                                                                                                                            <  2:382544/112‑1 (MQ=255)                                                          aTGCCAACGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCg                                                                                   >  1:1417002/1‑150 (MQ=255)                                                             ccAACGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCga                                                                                  >  1:1164820/1‑148 (MQ=255)                                                             ccAACGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCga                                                                                  <  2:1164820/148‑1 (MQ=255)                                                             ccAACGGCGAGCAGGTGCCGTTAAGCGCCTTAGTCACCACCCAGTGGGATTAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCgaga                                                                                <  2:867353/150‑1 (MQ=255)                                                             aaggcccgtccaggcgtagccgatacctggcggcagctcgctgaccaggcgctccatctcggccattgcctgcccggtactgtgcCCCGTCGATCCGCATCGCCGGCGACGCCTCGCCgg                                                                                                              >  1:692314‑M1/86‑120 (MQ=255)                                                             aaggcccgtccaggcgtagccgatacctggcggcagctcgctgaccaggcgctccatctcggccattgcctgcccggtactgtgcCCCGTCGATCCGCATCGCCGGCGACGCCTCGCCgg                                                                                                              <  2:692314‑M1/35‑1 (MQ=255)                                                              cAACGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGAt                                                                               >  1:1339604/1‑150 (MQ=255)                                                                 cGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATAGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGa                                                                            <  1:468075/150‑1 (MQ=255)                                                                     gAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAgcgc                                                                        >  1:1203592/1‑150 (MQ=255)                                                                           gTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCGGAGTTGGGGCTCTTGGTc                                                                  >  2:1104867/1‑150 (MQ=255)                                                                            tGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCGACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCa                                                                 >  1:1367367/1‑150 (MQ=255)                                                                              ctgTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGc                                                               <  2:90316/148‑1 (MQ=255)                                                                              ccGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTg                                                                     <  1:1220242/144‑1 (MQ=255)                                                                              ccGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTg                                                                     >  2:1220242/1‑144 (MQ=255)                                                                                  tCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGc                                                           <  1:1015944/150‑1 (MQ=255)                                                                                    aGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCCATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTg                                                         >  1:59256/1‑150 (MQ=255)                                                                                       gcCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGCGCCCCCGCTCAGCGATCTgccg                                                      <  2:1417002/150‑1 (MQ=255)                                                                                         cTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGACCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTgccgcc                                                    >  1:932613/1‑150 (MQ=255)                                                                                           tCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAg                                                  <  1:931161/150‑1 (MQ=255)                                                                                             ttCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGggcagg                                                                                            <  2:1288311/105‑1 (MQ=255)                                                                                             ttCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGggcagg                                                                                            >  1:1288311/2‑106 (MQ=255)                                                                                               caccacCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCga                                                                                  >  1:472526/1‑114 (MQ=255)                                                                                               caccacCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCga                                                                                  <  2:472526/114‑1 (MQ=255)                                                                                                  caccCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTgc                                                        <  1:1240042/137‑1 (MQ=255)                                                                                                  caccCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTgc                                                        >  2:1240042/1‑137 (MQ=255)                                                                                                     ccAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAg                                                  <  1:1068317/140‑1 (MQ=255)                                                                                                     ccAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAg                                                  >  2:1068335/1‑140 (MQ=255)                                                                                                     ccAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAg                                                  <  1:1068335/140‑1 (MQ=255)                                                                                                     ccAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAg                                                  >  2:1068317/1‑140 (MQ=255)                                                                                                        gTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGc                                     >  2:381575/1‑150 (MQ=255)                                                                                                          gggAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCt                                   <  2:853922/150‑1 (MQ=255)                                                                                                               gaggGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACg                              >  1:507120/1‑150 (MQ=255)                                                                                                                aggGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACgg                             >  2:200891/1‑150 (MQ=255)                                                                                                                aggGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACgg                             <  1:381575/150‑1 (MQ=255)                                                                                                                aggGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACgg                             <  2:1339604/150‑1 (MQ=255)                                                                                                                    atctcggccattgcctgcccggtactgtgcCCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGggcagg                                                                                            <  1:1301517‑M1/53‑1 (MQ=255)                                                                                                                    atctcggccattgcctgcccggtactgtgcCCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGggcagg                                                                                            >  2:1301517‑M1/31‑83 (MQ=255)                                                                                                                       ggTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTc                      <  1:363663/150‑1 (MQ=255)                                                                                                                           cAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTAc                  <  2:34335/150‑1 (MQ=255)                                                                                                                                  tGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGgaga           >  2:941748/1‑150 (MQ=255)                                                                                                                                    cgcTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAg         <  2:507120/150‑1 (MQ=255)                                                                                                                                    cgcTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAg         >  2:732737/1‑150 (MQ=255)                                                                                                                                       tACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGtc      <  2:35968/150‑1 (MQ=255)                                                                                                                                        aCAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAAGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAg               <  2:1249070/140‑1 (MQ=255)                                                                                                                                        aCAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAAGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAg               >  1:1249070/1‑140 (MQ=255)                                                                                                                                           aCGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACCGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCa  >  1:677243/1‑150 (MQ=255)                                                                                                                                                 aCCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATg                                                                              <  1:622968/68‑1 (MQ=255)                                                                                                                                                 aCCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATg                                                                              >  2:622968/1‑68 (MQ=255)                                                                                                                                                  |                                                                                                                                               AGGCAGAGCAAGGCGAACGCATGACCCCCGAAAGCGTGCTGCGCCTCTATGCTCCCAATGCCAACGGCGAGCAGGTGCCGTTCAGCGCCTTCGTCACCACCCAGTGGGAGGAGGGCCCGGTGCAACTGGTGCGCTACAACGGTTACCCGTCGATCCGCATCGCCGGCGACGCCTCGCCGGGGCACAGTACCGGGCAGGCAATGGCCGAGATGGAGCGCCTGGTCAGCGAGCTGCCGCCAGGTATCGGCTACGCCTGGACGGGCCTTTCCTACCAGGAGAAGGTCTCCA  >  NC_002947/3216434‑3216721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.