New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3885033 =	56 (1.070)	4 (0.080)	4/240	NT	6.5%	coding (874/1617 nt)	PP_3429	two component system response regulator/sensor histidine kinase
	?	NC_002947	3885081 =	60 (1.170)					coding (922/1617 nt)	PP_3429	two component system response regulator/sensor histidine kinase

CGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCTGAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCG  >  NC_002947/3884886‑3885182                                                                                                                                                    |                                                                                                                                                       cttggtgctgaagaagggttcgaaggcgtgctccagcgtgctttgcgccatgccttggccgctgtcggtgattcgcaggcgcacatagtcgccagtgcgcaaagcgccgtcagcagcttgctcggtggcgatgtgatgattgttcgcCTc                                                                                                                                                      >  1:1067267‑M1/148‑150 (MQ=255)     taGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCTGAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATg                                                                                                                                                  >  2:1265654/1‑150 (MQ=255)          cTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCTGAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATgcgc‑gc                                                                                                                                            <  2:971746/150‑1 (MQ=255)            gCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCTGAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGa                                                                                                                                          <  2:46567/150‑1 (MQ=255)                  cTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCTGAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCAt                                                                                                                                    >  2:343451/1‑150 (MQ=255)                            gCAGAACGCCTGGGCGCTCGCCTGAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGt                                                                                                                          >  2:324713/1‑150 (MQ=255)                             cAGAACGCCTGGGCGCTCGCCTGAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTg                                                                                                                         <  2:1039110/150‑1 (MQ=255)                                    ccTGGGCGCGCGGCTGAGTCCGTCGTTGCCCTTGCACGTCCACGCGTCAGAAGACCTTTGGCCCGTGGCTGCTGATGACAAGCAGTTCCAGGCTGCCCTCAACAACCTGCTGCGCTATGCGC‑GCGCGGCCATGCCCAACGGTGGCCTTCt                                                                                                                  <  2:147572/150‑1 (MQ=255)                                      tGGGCGCTCGCCTGAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTAc                                                                                                                >  2:326661/1‑150 (MQ=255)                                        ggCGCTCGCCTGAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGc                                                                                                              >  2:282099/1‑150 (MQ=255)                                        gctttgcgccatgccttggccgctgtcggtgattcgcaggcgcacatagtcgccagtgcgcaaagcgccgtcaacagcttgctcggtggcgatgtgatgattgttcgcCTCGATGCGTAGC‑AGGCCATGCCCAACGGTGGCCTGCTACGc                                                                                                              >  2:628296‑M1/109‑150 (MQ=255)                                          tttgcgccatgccttggccgctgtcggtgattcgcaggcgcacatagtcgccagtgcgcaaagcgccgtcagcagcttgctcggtggcgatgtgatgattgttcgcCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCAt                                                                                                            <  2:480717‑M1/44‑1 (MQ=255)                                              cgccatgccttggccgctgtcggtgattcgcaggcgcacatagtcgccagtgcgcaaagcgccgtcagcagcttgctcggtggcgatgtgatgattgttcgcCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAg                                                                                                        >  1:480717‑M1/103‑150 (MQ=255)                                              cGCCTGAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACATCTGGTCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAg                                                                                                        <  1:86352/150‑1 (MQ=255)                                               gccatgccttggccgctgtcggtgattcgcaggcgcacatagtcgccagtgcgcaaagcgccgtcagcagcttgctcggtggcgatgtgatgattgttcgcCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAgg                                                                                                       >  1:365112‑M1/102‑150 (MQ=255)                                               gCCTGAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAgg                                                                                                       >  2:880888/1‑150 (MQ=255)                                                ccTGAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGc                                                                                                      <  1:1230021/150‑1 (MQ=255)                                                  tGAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGa                                                                                                    <  1:1265654/150‑1 (MQ=255)                                                   gAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGaa                                                                                                   <  1:343451/150‑1 (MQ=255)                                                       ccGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATgcgc                                                                                                                                               >  1:1260874/1‑103 (MQ=255)                                                       ccGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATgcgc                                                                                                                                               <  2:1260874/103‑1 (MQ=255)                                                        cGTCGATAACCCTGCAAGTGCACACGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAatc                                                                                              <  2:1079943/150‑1 (MQ=255)                                                         gTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAAc                                                                                                                             >  1:962364/1‑118 (MQ=255)                                                         gTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAAc                                                                                                                             <  2:962364/118‑1 (MQ=255)                                                          tCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAatcat                                                                                            <  2:122201/150‑1 (MQ=255)                                                             aTAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAgg                                                                                                       >  2:436158/1‑136 (MQ=255)                                                             aTAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAgg                                                                                                       <  1:436158/136‑1 (MQ=255)                                                               aaCCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACAt                                                                                       <  2:472530/150‑1 (MQ=255)                                                                aCCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATgcgc‑gc                                                                                                                                            >  1:813852/1‑96 (MQ=255)                                                                aCCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATgcgc‑gc                                                                                                                                            <  2:813852/96‑1 (MQ=255)                                                                  ccTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGc                                                                                    >  2:181348/1‑150 (MQ=255)                                                                    tGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGATGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGATGCGAACAATCATCACATCGCCa                                                                                  >  2:287907/1‑150 (MQ=255)                                                                        aGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGa                                                                              <  1:1088595/150‑1 (MQ=255)                                                                         gTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCaa                                                                                                                                                    <  2:1005911/80‑1 (MQ=255)                                                                         gTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCaa                                                                                                                                                    >  1:1005911/1‑80 (MQ=255)                                                                             aCGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACg                                                                                                                            <  2:674796/99‑1 (MQ=255)                                                                             aCGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACg                                                                                                                            >  1:674796/1‑99 (MQ=255)                                                                             aCGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAg                                                                         <  1:880888/150‑1 (MQ=255)                                                                             aCGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAg                                                                         <  1:326661/150‑1 (MQ=255)                                                                                     aaaGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAatcat                                                                                            >  1:616432/1‑123 (MQ=255)                                                                                     aaaGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAatcat                                                                                            <  2:616432/123‑1 (MQ=255)                                                                                         aCCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGgcg                                                             >  2:855470/1‑150 (MQ=255)                                                                                           cTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCt                                                           >  2:500812/1‑150 (MQ=255)                                                                                                 cccGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTgcgc                                                     >  2:1065156/1‑150 (MQ=255)                                                                                                  ccGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGG‑GCGAGGCCATGAAAAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCa                                                    >  1:1242218/1‑150 (MQ=255)                                                                                                      ggAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTgg                                                <  1:303493/150‑1 (MQ=255)                                                                                                             gATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTAt                                         <  1:282099/150‑1 (MQ=255)                                                                                                               tGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTAtgt                                       >  2:1312430/1‑150 (MQ=255)                                                                                                                  ccAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTAtgtgag                                    >  1:466057/1‑148 (MQ=255)                                                                                                                  ccAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTgcg                                    >  1:189757/1‑150 (MQ=255)                                                                                                                  ccAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCCCACTGGCGACTATGTgcg                                    >  2:317747/1‑150 (MQ=255)                                                                                                                   cagcagTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTTCGCACTGGCGACTATGTgcgc                                   >  2:233126/1‑150 (MQ=255)                                                                                                                   cagcagTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTgcgc                                   >  1:510855/1‑150 (MQ=255)                                                                                                                     gcagTTGCAGGAGGCCCTCGACAAACTGCTGCTCAATGCGC‑GCGAGGCCATGCGCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCt                                 >  2:406466/1‑150 (MQ=255)                                                                                                                                aggCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGAAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCg                      >  1:200394/1‑150 (MQ=255)                                                                                                                                   cccTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACa                   >  1:644804/1‑150 (MQ=255)                                                                                                                                    ccTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCAc                                                   <  2:97786/117‑1 (MQ=255)                                                                                                                                    ccTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCAc                                                   >  1:97786/1‑117 (MQ=255)                                                                                                                                    ccTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCggaag                  >  1:950958/1‑146 (MQ=255)                                                                                                                                           aaCCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCaa           <  2:1242218/150‑1 (MQ=255)                                                                                                                                             ccTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAgg         >  2:68603/1‑150 (MQ=255)                                                                                                                                              ctgctgCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGc        <  2:742902/150‑1 (MQ=255)                                                                                                                                              ctgctgCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGc        >  1:829650/1‑150 (MQ=255)                                                                                                                                                   gctCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATACCATCTCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGgc   <  2:1113589/150‑1 (MQ=255)                                                                                                                                                    CTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGgcg  <  1:612693‑M1/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                       CGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCTGAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGC‑GCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCG  >  NC_002947/3884886‑3885182

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.